RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 PTPRSQ13332 1948 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 SYCE3A1L190 88 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 PPP1R3GB7ZBB8 358 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 ABLIM1O14639 778 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 LIG4P49917 911 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 KNOP1Q1ED39 458 aaKnown RBP22.8■■□□□ 1.24
OTUB1-211ENST00000543004 TWF2Q6IBS0 349 aaKnown RBP22.8■■□□□ 1.24
OTUB1-211ENST00000543004 ZBTB33Q86T24 672 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 ADSSL1Q8N142 457 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 GUF1Q8N442 669 aaKnown RBP22.8■■□□□ 1.24
OTUB1-211ENST00000543004 GZF1Q9H116 711 aaPredicted RBP22.8■■□□□ 1.24
OTUB1-211ENST00000543004 KCTD10Q9H3F6 313 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 PTPRHQ9HD43 1115 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 ANKFY1Q9P2R3 1169 aa22.8■■□□□ 1.24
OTUB1-211ENST00000543004 PIGRP01833 764 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 SCP2P22307 547 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 ADSSP30520 456 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 NCBP1Q09161 790 aaKnown RBP22.79■■□□□ 1.24
OTUB1-211ENST00000543004 ZSCAN23Q3MJ62 389 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 TMEM240Q5SV17 173 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 KLHL10Q6JEL2 608 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 NOTUMQ6P988 496 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 ZPBP2Q6X784 338 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.79■■□□□ 1.24
OTUB1-211ENST00000543004 APBB2Q92870 758 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 TMEM206Q9H813 350 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 TNFSF13BQ9Y275 285 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 UBE4BO95155 1302 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.79■■□□□ 1.24
OTUB1-211ENST00000543004 ENPP3O14638 875 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 NPTXRO95502 500 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 HARSP12081 509 aaKnown RBP22.79■■□□□ 1.24
OTUB1-211ENST00000543004 ZSCAN20P17040 1043 aaPredicted RBP22.79■■□□□ 1.24
OTUB1-211ENST00000543004 PROZP22891 400 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 AXLP30530 894 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 NLRP12P59046 1061 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 MLLT1Q03111 559 aaPredicted RBP22.79■■□□□ 1.24
OTUB1-211ENST00000543004 SEMA6BQ9H3T3 888 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 CHST12Q9NRB3 414 aa22.79■■□□□ 1.24
OTUB1-211ENST00000543004 CLIC2O15247 247 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 PFKMP08237 780 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 ABCD1P33897 745 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 PMS1P54277 932 aaKnown RBP22.78■■□□□ 1.24
OTUB1-211ENST00000543004 IKBKEQ14164 716 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 ZNF568Q3ZCX4 644 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 SEZ6Q53EL9 994 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 SASS6Q6UVJ0 657 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 CEP120Q8N960 986 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 ZSWIM2Q8NEG5 633 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 TCHPQ9BT92 498 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 GBP3Q9H0R5 595 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 CDT1Q9H211 546 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 TSPYL2Q9H2G4 693 aaPredicted RBP22.78■■□□□ 1.24
OTUB1-211ENST00000543004 RGS18Q9NS28 235 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 EXOC7Q9UPT5 735 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 HES2Q9Y543 173 aa22.78■■□□□ 1.24
OTUB1-211ENST00000543004 TRIM49BA6NDI0 452 aa22.77■■□□□ 1.24
OTUB1-211ENST00000543004 TOM1L1O75674 476 aa22.77■■□□□ 1.24
OTUB1-211ENST00000543004 FGBP02675 491 aa22.77■■□□□ 1.24
OTUB1-211ENST00000543004 COBLL1Q53SF7 1204 aa22.77■■□□□ 1.24
OTUB1-211ENST00000543004 SLC27A1Q6PCB7 646 aa22.77■■□□□ 1.24
OTUB1-211ENST00000543004 CBWD1Q9BRT8 395 aa22.77■■□□□ 1.24
OTUB1-211ENST00000543004 FTHL17Q9BXU8 183 aa22.77■■□□□ 1.24
OTUB1-211ENST00000543004 PCIF1Q9H4Z3 704 aa22.77■■□□□ 1.24
OTUB1-211ENST00000543004 CXXC1Q9P0U4 656 aaPredicted RBP22.77■■□□□ 1.24
OTUB1-211ENST00000543004 N4BP3O15049 544 aa22.76■■□□□ 1.23
OTUB1-211ENST00000543004 MATR3P43243 847 aaKnown RBP eCLIP22.76■■□□□ 1.23
OTUB1-211ENST00000543004 C9orf50Q5SZB4 431 aa22.76■■□□□ 1.23
OTUB1-211ENST00000543004 MPZL3Q6UWV2 235 aa22.76■■□□□ 1.23
OTUB1-211ENST00000543004 TMCO2Q7Z6W1 182 aaPredicted RBP22.76■■□□□ 1.23
OTUB1-211ENST00000543004 AGPAT3Q9NRZ7 376 aa22.76■■□□□ 1.23
OTUB1-211ENST00000543004 FAM105AQ9NUU6 356 aa22.76■■□□□ 1.23
OTUB1-211ENST00000543004 TTC3P53804 2025 aa22.76■■□□□ 1.23
OTUB1-211ENST00000543004 MEIS3P2A8K0S8 358 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 C9IYK1 514 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 CLDN3O15551 220 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 STX17P56962 302 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 DEFB103AP81534 67 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 TYRO3Q06418 890 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 ZBTB41Q5SVQ8 909 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 TMEM192Q8IY95 271 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 SMG8Q8ND04 991 aaKnown RBP22.75■■□□□ 1.23
OTUB1-211ENST00000543004 MED15Q96RN5 788 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 GDF15Q99988 308 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 NXF3Q9H4D5 531 aaKnown RBP22.75■■□□□ 1.23
OTUB1-211ENST00000543004 CTNND2Q9UQB3 1225 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 PCDHB2Q9Y5E7 798 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 TRIP11Q15643 1979 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 OSTNP61366 133 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 MCL1Q07820 350 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 ZCWPW2Q504Y3 356 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 ANKRD40Q6AI12 368 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 PSRC1Q6PGN9 363 aaPredicted RBP22.75■■□□□ 1.23
OTUB1-211ENST00000543004 C11orf57Q6ZUT1 292 aaPredicted RBP22.75■■□□□ 1.23
OTUB1-211ENST00000543004 SLC24A5Q71RS6 500 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 POMGNT1Q8WZA1 660 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 LPPQ93052 612 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 EEF2KMTQ96G04 330 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 FUCA2Q9BTY2 467 aa22.75■■□□□ 1.23
OTUB1-211ENST00000543004 RNF39Q9H2S5 420 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms