RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 IFT74Q96LB3 600 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 TMEM8AQ9HCN3 771 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 ARFGAP3Q9NP61 516 aa15.36■□□□□ 0.05
LDB3-207ENST00000542786 UBE2TQ9NPD8 197 aaPredicted RBP15.36■□□□□ 0.05
LDB3-207ENST00000542786 TOPORSQ9NS56 1045 aaPredicted RBP15.36■□□□□ 0.05
LDB3-207ENST00000542786 ZC3H4Q9UPT8 1303 aaKnown RBP15.36■□□□□ 0.05
LDB3-207ENST00000542786 GGPS1O95749 300 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 TUBBP07437 444 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 SCP2P22307 547 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 ABCD1P33897 745 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 RFC5P40937 340 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 NAMPTP43490 491 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 GPC3P51654 580 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 CLDN10P78369 228 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 TTLL12Q14166 644 aaPredicted RBP15.35■□□□□ 0.05
LDB3-207ENST00000542786 ARHGAP44Q17R89 818 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 CCDC62Q6P9F0 684 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 PALB2Q86YC2 1186 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 FAM71AQ8IYT1 594 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 TPCN2Q8NHX9 752 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 HAPLN2Q9GZV7 340 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 SMARCAL1Q9NZC9 954 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 GLTPD2A6NH11 291 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 MAP2K7O14733 419 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 HNRNPDLO14979 420 aaKnown RBP15.35■□□□□ 0.05
LDB3-207ENST00000542786 EDN1P05305 212 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 CXCR5P32302 372 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 GALCP54803 685 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 C2orf54Q08AI8 447 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 CETN1Q12798 172 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 ARMC9Q7Z3E5 817 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 KRT222Q8N1A0 295 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 GPD1LQ8N335 351 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 SPATA4Q8NEY3 305 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 HELQQ8TDG4 1101 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 SLC20A1Q8WUM9 679 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 POMGNT1Q8WZA1 660 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 SHC3Q92529 594 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 POP1Q99575 1024 aaKnown RBP15.35■□□□□ 0.05
LDB3-207ENST00000542786 EHD2Q9NZN4 543 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 STXBP5LQ9Y2K9 1186 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 UTRNP46939 3433 aa15.35■□□□□ 0.05
LDB3-207ENST00000542786 ZBTB42B2RXF5 422 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 CHRNB2P17787 502 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 OSBPP22059 807 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 WNT7BP56706 349 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 MAP2K1Q02750 393 aaPredicted RBP15.34■□□□□ 0.05
LDB3-207ENST00000542786 LY6KQ17RY6 165 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 KRT39Q6A163 491 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 SHCBP1Q8NEM2 672 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 CAGE1Q8TC20 777 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 TAS1R2Q8TE23 839 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 SEPT1Q8WYJ6 367 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 CCDC127Q96BQ5 260 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 PSMB7Q99436 277 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 GPR20Q99678 358 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 MROH8Q9H579 483 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 ABCB6Q9NP58 842 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 TAS2R14Q9NYV8 317 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 KCNG1Q9UIX4 513 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 NOCTQ9UK39 431 aaKnown RBP15.34■□□□□ 0.05
LDB3-207ENST00000542786 L1RE1Q9UN81 338 aa15.34■□□□□ 0.05
LDB3-207ENST00000542786 EXTL3O43909 919 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 MAFO75444 373 aaPredicted RBP15.33■□□□□ 0.05
LDB3-207ENST00000542786 TMEM253P0C7T8 217 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 CCDC172P0C7W6 258 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 TCF7P36402 384 aaPredicted RBP15.33■□□□□ 0.05
LDB3-207ENST00000542786 STAT5BP51692 787 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 CELF3Q5SZQ8 465 aaKnown RBP15.33■□□□□ 0.05
LDB3-207ENST00000542786 FAM160B1Q5W0V3 765 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 CRELD2Q6UXH1 353 aaPredicted RBP15.33■□□□□ 0.05
LDB3-207ENST00000542786 PSPC1Q8WXF1 523 aaKnown RBP15.33■□□□□ 0.05
LDB3-207ENST00000542786 ZNF516Q92618 1163 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 MMP19Q99542 508 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 AGPAT1Q99943 283 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 PPME1Q9Y570 386 aa15.33■□□□□ 0.05
LDB3-207ENST00000542786 LOC102724159A0A0B4J2E5 919 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 CES2O00748 559 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 NAP1L1P55209 391 aaKnown RBP15.33■□□□□ 0.04
LDB3-207ENST00000542786 ERVK-9P63128 1117 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 MKRN4PQ13434 485 aaPredicted RBP15.33■□□□□ 0.04
LDB3-207ENST00000542786 DRP2Q13474 957 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 SNAPC2Q13487 334 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 PRPF4BQ13523 1007 aaKnown RBP15.33■□□□□ 0.04
LDB3-207ENST00000542786 CAPSQ13938 189 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 PSMD6Q15008 389 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 TCEAL1Q15170 157 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 PWP2Q15269 919 aaKnown RBP15.33■□□□□ 0.04
LDB3-207ENST00000542786 SV2AQ7L0J3 742 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 EEPD1Q7L9B9 569 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 RNF14Q9UBS8 474 aa15.33■□□□□ 0.04
LDB3-207ENST00000542786 ADGRA2Q96PE1 1338 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 IGKV6-21A0A0C4DH24 114 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 KIF4AO95239 1232 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 KCNV1Q6PIU1 500 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 MSL3Q8N5Y2 521 aaKnown RBP15.32■□□□□ 0.04
LDB3-207ENST00000542786 FBXL13Q8NEE6 735 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 EPS8L1Q8TE68 723 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 SLC7A3Q8WY07 619 aa15.32■□□□□ 0.04
LDB3-207ENST00000542786 RFFLQ8WZ73 363 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms