RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 TRIM43BA6NCK2 446 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 M0QZ92 97 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 LAMTOR4Q0VGL1 99 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 MAN2A1Q16706 1144 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 NLRP7Q8WX94 980 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 TRIM43Q96BQ3 446 aaPredicted RBP30.38■■■□□ 2.45
CCM2-218ENST00000541586 HVCN1Q96D96 273 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 EIF2AK3Q9NZJ5 1116 aaKnown RBP30.38■■■□□ 2.45
CCM2-218ENST00000541586 TBX21Q9UL17 535 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 TBX20Q9UMR3 447 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 UMODL1Q5DID0 1318 aa30.38■■■□□ 2.45
CCM2-218ENST00000541586 GLRA2P23416 452 aa30.37■■■□□ 2.45
CCM2-218ENST00000541586 CYP2C18P33260 490 aa30.37■■■□□ 2.45
CCM2-218ENST00000541586 VWA3BQ502W6 1294 aa30.37■■■□□ 2.45
CCM2-218ENST00000541586 CDHR5Q9HBB8 845 aa30.37■■■□□ 2.45
CCM2-218ENST00000541586 KCNG1Q9UIX4 513 aa30.37■■■□□ 2.45
CCM2-218ENST00000541586 ZKSCAN5Q9Y2L8 839 aa30.37■■■□□ 2.45
CCM2-218ENST00000541586 CCL23P55773 120 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 MRPS6P82932 125 aaKnown RBP30.36■■■□□ 2.45
CCM2-218ENST00000541586 MXD4Q14582 209 aaPredicted RBP30.36■■■□□ 2.45
CCM2-218ENST00000541586 ARMCX5Q6P1M9 558 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 ZSCAN30Q86W11 494 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 LRRC8AQ8IWT6 810 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 ARHGAP28Q9P2N2 729 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 CDY2AQ9Y6F7 541 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 ITIH6Q6UXX5 1313 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 AKAP3O75969 853 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 LRMPQ12912 555 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 RPAINQ86UA6 219 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 MAP4K3Q8IVH8 894 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 TRIM59Q8IWR1 403 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 RNF149Q8NC42 400 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 NDST4Q9H3R1 872 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 DMAC2Q9NW81 257 aa30.36■■■□□ 2.45
CCM2-218ENST00000541586 SLC16A3O15427 465 aaKnown RBP30.35■■■□□ 2.45
CCM2-218ENST00000541586 ASAP2O43150 1006 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 CHRNA1P02708 482 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 RAG1P15918 1043 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 SYN1P17600 705 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 NAMPTP43490 491 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 CASP4P49662 377 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 GPC3P51654 580 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 PPP2R5AQ15172 486 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 CEP135Q66GS9 1140 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 OSMRQ99650 979 aa30.35■■■□□ 2.45
CCM2-218ENST00000541586 A0A087WZ62 844 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 A0A1W2PQC6 194 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 LRRIQ4A6NIV6 560 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 H0YCG3 227 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 GPR32O75388 356 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 RPLP2P05387 115 aaKnown RBP30.34■■■□□ 2.45
CCM2-218ENST00000541586 FRMD5Q7Z6J6 570 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 CCDC150Q8NCX0 1101 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 SCLYQ96I15 445 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 FDXACB1Q9BRP7 624 aaPredicted RBP30.34■■■□□ 2.45
CCM2-218ENST00000541586 CELF4Q9BZC1 486 aaKnown RBP30.34■■■□□ 2.45
CCM2-218ENST00000541586 CGNQ9P2M7 1197 aaKnown RBP30.34■■■□□ 2.45
CCM2-218ENST00000541586 EXOC7Q9UPT5 735 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 ALPK3Q96L96 1907 aa30.34■■■□□ 2.45
CCM2-218ENST00000541586 TISP43B9A030 160 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 SELPP16109 830 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 ITGB8P26012 769 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 LRRC8DQ7L1W4 858 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 SLC9A9Q8IVB4 645 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 ZMYND8Q9ULU4 1186 aaPredicted RBP30.33■■■□□ 2.45
CCM2-218ENST00000541586 TRPV2Q9Y5S1 764 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 ESPNB1AK53 854 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 PITPNM1O00562 1244 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 CSDE1O75534 798 aaKnown RBP30.33■■■□□ 2.45
CCM2-218ENST00000541586 EPB41P11171 864 aaKnown RBP30.33■■■□□ 2.45
CCM2-218ENST00000541586 CYP2J2P51589 502 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 CAPSQ13938 189 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 ADAMTS10Q9H324 1103 aa30.33■■■□□ 2.45
CCM2-218ENST00000541586 ARMCX3Q9UH62 379 aaPredicted RBP30.33■■■□□ 2.45
CCM2-218ENST00000541586 KIAA0355O15063 1070 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 TIMP1P01033 207 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 IQCF3P0C7M6 154 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 SFPQP23246 707 aaKnown RBP eCLIP30.32■■■□□ 2.44
CCM2-218ENST00000541586 ABCD1P33897 745 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 SNRPFP62306 86 aaKnown RBP30.32■■■□□ 2.44
CCM2-218ENST00000541586 CDC42EP1Q00587 391 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 TFDP1Q14186 410 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 MYBPC2Q14324 1141 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 FKBP15Q5T1M5 1219 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 TAS1R3Q7RTX0 852 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 DEPTORQ8TB45 409 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 TMEM174Q8WUU8 243 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 KCNN1Q92952 543 aa30.32■■■□□ 2.44
CCM2-218ENST00000541586 UTP18Q9Y5J1 556 aaKnown RBP eCLIP30.32■■■□□ 2.44
CCM2-218ENST00000541586 CAND2O75155 1236 aa30.31■■■□□ 2.44
CCM2-218ENST00000541586 MGAT3Q09327 533 aa30.31■■■□□ 2.44
CCM2-218ENST00000541586 C12orf56Q8IXR9 622 aa30.31■■■□□ 2.44
CCM2-218ENST00000541586 PSMC2P35998 433 aaKnown RBP30.3■■■□□ 2.44
CCM2-218ENST00000541586 CRYBB1P53674 252 aaPredicted RBP30.3■■■□□ 2.44
CCM2-218ENST00000541586 RBL2Q08999 1139 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 GOLGA8FQ08AF8 430 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 GOLGA8DPQ0D2H9 430 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 MKNK1Q9BUB5 465 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 WNT8AQ9H1J5 351 aa30.3■■■□□ 2.44
CCM2-218ENST00000541586 METTL14Q9HCE5 456 aaKnown RBP30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms