RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 TTC27Q6P3X3 843 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 SCARA5Q6ZMJ2 495 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 GPATCH11Q8N954 259 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 ZNF473Q8WTR7 871 aaKnown RBP16.18■□□□□ 0.18
VARS2-211ENST00000541562 POLR3CQ9BUI4 534 aaPredicted RBP16.18■□□□□ 0.18
VARS2-211ENST00000541562 EIF4E1BA6NMX2 242 aaKnown RBP16.18■□□□□ 0.18
VARS2-211ENST00000541562 IFI16Q16666 785 aaKnown RBP16.18■□□□□ 0.18
VARS2-211ENST00000541562 ZBTB41Q5SVQ8 909 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 ZNF662Q6ZS27 426 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 NLRP14Q86W24 1093 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 RFFLQ8WZ73 363 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 LRRIQ4A6NIV6 560 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 CCNE2O96020 404 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 ALS2CLQ60I27 953 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 RSBN1LQ6PCB5 846 aaPredicted RBP16.18■□□□□ 0.18
VARS2-211ENST00000541562 XXYLT1Q8NBI6 393 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 LRRN4Q8WUT4 740 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 LMBR1Q8WVP7 490 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 RNF25Q96BH1 459 aaPredicted RBP16.18■□□□□ 0.18
VARS2-211ENST00000541562 KREMEN1Q96MU8 473 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 NAP1L4Q99733 375 aaKnown RBP16.18■□□□□ 0.18
VARS2-211ENST00000541562 GLT8D2Q9H1C3 349 aa16.18■□□□□ 0.18
VARS2-211ENST00000541562 CTNND1O60716 968 aaKnown RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 WNT7BP56706 349 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 JAM2P57087 298 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 CXCL9Q07325 125 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 SNRNP35Q16560 246 aaKnown RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 CYP4F22Q6NT55 531 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 GMCL1P1Q8NEA9 526 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 ISCUQ9H1K1 167 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 RPAP3Q9H6T3 665 aaPredicted RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 ANAPC7Q9UJX3 599 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 SUGT1Q9Y2Z0 365 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 PPP1R37O75864 691 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 CCDC137Q6PK04 289 aaKnown RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 SCFD2Q8WU76 684 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 C11orf70Q9BRQ4 267 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 KMT5AQ9NQR1 393 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 KLRG2A4D1S0 409 aaPredicted RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 GOLGA8SH3BPF8 625 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 GOLGA8MH3BSY2 632 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 BCRP11274 1271 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 CNGA1P29973 690 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 MDH1P40925 334 aaKnown RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 QARSP47897 775 aaKnown RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 CORO7P57737 925 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 SF3B2Q13435 895 aaKnown RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 TMEM132AQ24JP5 1023 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 JAMLQ86YT9 394 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 DYDC1Q8WWB3 177 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 SYN2Q92777 582 aaPredicted RBP16.17■□□□□ 0.18
VARS2-211ENST00000541562 SLC5A5Q92911 643 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 EDEM3Q9BZQ6 932 aa16.17■□□□□ 0.18
VARS2-211ENST00000541562 LMNB1P20700 586 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 RPL21P46778 160 aaKnown RBP16.16■□□□□ 0.18
VARS2-211ENST00000541562 DYNLT1P63172 113 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 CETN1Q12798 172 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 FAM133BQ5BKY9 247 aaKnown RBP16.16■□□□□ 0.18
VARS2-211ENST00000541562 TADA2BQ86TJ2 420 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 VIL1P09327 827 aaKnown RBP16.16■□□□□ 0.18
VARS2-211ENST00000541562 GAP43P17677 238 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 ZNF564Q8TBZ8 553 aaPredicted RBP16.16■□□□□ 0.18
VARS2-211ENST00000541562 PBKQ96KB5 322 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 TRPC6Q9Y210 931 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 BZW2Q9Y6E2 419 aaKnown RBP16.16■□□□□ 0.18
VARS2-211ENST00000541562 GSTTP1A0A1W2PQM5 241 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 ADSSP30520 456 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 RNF207Q6ZRF8 634 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 TTLL6Q8N841 843 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 MYCBPAPQ8TBZ2 947 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 SYTL5Q8TDW5 730 aaPredicted RBP16.16■□□□□ 0.18
VARS2-211ENST00000541562 CAVIN3Q969G5 261 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 CABS1Q96KC9 395 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 SCLT1Q96NL6 688 aa16.16■□□□□ 0.18
VARS2-211ENST00000541562 GOLGA6L10A0A0M3HER8 536 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 MAGEA9P43362 315 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 PTGISQ16647 500 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 SNRNP48Q6IEG0 339 aaKnown RBP16.15■□□□□ 0.18
VARS2-211ENST00000541562 CEP57Q86XR8 500 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 IQCDQ96DY2 449 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 BORCS6Q96GS4 357 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 C9orf72Q96LT7 481 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 CHST7Q9NS84 486 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 DDX3YO15523 660 aaKnown RBP16.15■□□□□ 0.18
VARS2-211ENST00000541562 P4HBP07237 508 aaKnown RBP16.15■□□□□ 0.18
VARS2-211ENST00000541562 GJB1P08034 283 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 KRT10P13645 584 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 NPTX2P47972 431 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 E2F5Q15329 346 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 STXBP4Q6ZWJ1 553 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 TMC3Q7Z5M5 1100 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 NIM1KQ8IY84 436 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 MBOAT7Q96N66 472 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 OLFML3Q9NRN5 406 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 TBX3O15119 743 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 ATF7P17544 494 aaPredicted RBP16.15■□□□□ 0.18
VARS2-211ENST00000541562 CIITAP33076 1130 aa16.15■□□□□ 0.18
VARS2-211ENST00000541562 MARSP56192 900 aaKnown RBP16.15■□□□□ 0.18
VARS2-211ENST00000541562 RAPGEF5Q92565 580 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms