RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 CSTF1Q05048 431 aaKnown RBP13.25□□□□□ -0.29
COPA-205ENST00000541366 PLA2G4FQ68DD2 849 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 PARM1Q6UWI2 310 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 ZNF410Q86VK4 478 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 COLGALT2Q8IYK4 626 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 SLC5A5Q92911 643 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 PGBD4Q96DM1 585 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 CCDC136Q96JN2 1154 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 NIFKQ9BYG3 293 aaKnown RBP13.25□□□□□ -0.29
COPA-205ENST00000541366 RHOBTB2Q9BYZ6 727 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 ZMYND12Q9H0C1 365 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 AGPAT5Q9NUQ2 364 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 SPATA6Q9NWH7 488 aaPredicted RBP13.25□□□□□ -0.29
COPA-205ENST00000541366 MIOSQ9NXC5 875 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 NAP1L2Q9ULW6 460 aaPredicted RBP13.25□□□□□ -0.29
COPA-205ENST00000541366 CHD6Q8TD26 2715 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 USP24Q9UPU5 2620 aa13.25□□□□□ -0.29
COPA-205ENST00000541366 ESYT2A0FGR8 921 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 MAFO75444 373 aaPredicted RBP13.24□□□□□ -0.29
COPA-205ENST00000541366 DNM2P50570 870 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 JAK3P52333 1124 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 CDC42EP1Q00587 391 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 UBXN2BQ14CS0 331 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 XKR3Q5GH77 459 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 TSSK4Q6SA08 328 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 CYP26C1Q6V0L0 522 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 RNF168Q8IYW5 571 aaPredicted RBP13.24□□□□□ -0.29
COPA-205ENST00000541366 ZNF579Q8NAF0 562 aaKnown RBP13.24□□□□□ -0.29
COPA-205ENST00000541366 SMG8Q8ND04 991 aaKnown RBP13.24□□□□□ -0.29
COPA-205ENST00000541366 RABGGTAQ92696 567 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 TEKT3Q9BXF9 490 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 PRKD2Q9BZL6 878 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 INO80BQ9C086 356 aaPredicted RBP13.24□□□□□ -0.29
COPA-205ENST00000541366 C6orf50Q9HD87 102 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.24□□□□□ -0.29
COPA-205ENST00000541366 PATJQ8NI35 1801 aa13.24□□□□□ -0.29
COPA-205ENST00000541366 KANSL1LA0AUZ9 987 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 LAMTOR5O43504 91 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 PSMD10O75832 226 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 PAPLNO95428 1278 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 TGM1P22735 817 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 NPEPPSP55786 919 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 DSG1Q02413 1049 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 LILRA6Q6PI73 481 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 ANO5Q75V66 913 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 GRASPQ7Z6J2 395 aaPredicted RBP13.23□□□□□ -0.29
COPA-205ENST00000541366 ZFP42Q96MM3 310 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 GAD1Q99259 594 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 RIT2Q99578 217 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 ESYT1Q9BSJ8 1104 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 GPR62Q9BZJ7 368 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 BMP2KQ9NSY1 1161 aaPredicted RBP13.23□□□□□ -0.29
COPA-205ENST00000541366 KANSL3Q9P2N6 904 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 STK39Q9UEW8 545 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 HES2Q9Y543 173 aa13.23□□□□□ -0.29
COPA-205ENST00000541366 CNTNAP2Q9UHC6 1331 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 ARL5CA6NH57 179 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 FAM170BA6NMN3 283 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 SPTLC1O15269 473 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 SRGAP2CP0DJJ0 459 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 FSHRP23945 695 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 SFNP31947 248 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 MLH1P40692 756 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 SCNN1GP51170 649 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 DSC1Q08554 894 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 MLF2Q15773 248 aaPredicted RBP13.22□□□□□ -0.29
COPA-205ENST00000541366 ZNF528Q3MIS6 628 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 ELMSAN1Q6PJG2 1045 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 ATRIPQ8WXE1 791 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 PHKBQ93100 1093 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 DDX23Q9BUQ8 820 aaKnown RBP13.22□□□□□ -0.29
COPA-205ENST00000541366 EIF2AQ9BY44 585 aaKnown RBP13.22□□□□□ -0.29
COPA-205ENST00000541366 BCO2Q9BYV7 579 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 PLEKHA4Q9H4M7 779 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 PARD6AQ9NPB6 346 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 ANO2Q9NQ90 1003 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 CHST7Q9NS84 486 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 CACNG4Q9UBN1 327 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 DPP7Q9UHL4 492 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 FBXO4Q9UKT5 387 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 USP18Q9UMW8 372 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 SMG5Q9UPR3 1016 aaKnown RBP13.22□□□□□ -0.29
COPA-205ENST00000541366 SSX2IPQ9Y2D8 614 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 COL4A3BPQ9Y5P4 624 aa13.22□□□□□ -0.29
COPA-205ENST00000541366 TDP2O95551 362 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 ITGA4P13612 1032 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 CPA1P15085 419 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 NCLP19338 710 aaKnown RBP13.21□□□□□ -0.29
COPA-205ENST00000541366 ST3GAL2Q16842 350 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 SLC44A4Q53GD3 710 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 PRSS55Q6UWB4 352 aaPredicted RBP13.21□□□□□ -0.29
COPA-205ENST00000541366 B3GNT9Q6UX72 402 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 ZBTB44Q8NCP5 570 aa13.21□□□□□ -0.29
COPA-205ENST00000541366 HDAC7Q8WUI4 952 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms