RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 PLXNA4Q9HCM2 1894 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 MYO7AQ13402 2215 aa11.5□□□□□ -0.57
CDCA3-208ENST00000540683 C19orf67A6NJJ6 358 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 H0YCG3 227 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 INPPL1O15357 1258 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 TSPAN1O60635 241 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 USO1O60763 962 aaKnown RBP11.49□□□□□ -0.57
CDCA3-208ENST00000540683 CXCL14O95715 111 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 CTSAP10619 480 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
CDCA3-208ENST00000540683 CYP11B2P19099 503 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 DNAJB1P25685 340 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 HOXA11P31270 313 aaPredicted RBP11.49□□□□□ -0.57
CDCA3-208ENST00000540683 ABCD1P33897 745 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 NAMPTP43490 491 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 CAPSQ13938 189 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 DCAF4L1Q3SXM0 396 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 ARL6IP4Q66PJ3 421 aaKnown RBP11.49□□□□□ -0.57
CDCA3-208ENST00000540683 PADI6Q6TGC4 694 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 LRRC55Q6ZSA7 311 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 GPR65Q8IYL9 337 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 VPS52Q8N1B4 723 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 IGSF21Q96ID5 467 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 CDK5RAP3Q96JB5 506 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 NECAB3Q96P71 396 aaPredicted RBP11.49□□□□□ -0.57
CDCA3-208ENST00000540683 COLEC11Q9BWP8 271 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 PHF7Q9BWX1 381 aaPredicted RBP11.49□□□□□ -0.57
CDCA3-208ENST00000540683 XPNPEP1Q9NQW7 623 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 MRPL17Q9NRX2 175 aaKnown RBP11.49□□□□□ -0.57
CDCA3-208ENST00000540683 RNF19AQ9NV58 838 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 KCND2Q9NZV8 630 aa11.49□□□□□ -0.57
CDCA3-208ENST00000540683 A0A1B0GUA9 196 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.48□□□□□ -0.57
CDCA3-208ENST00000540683 PRR33A8MZF0 331 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 TBX10O75333 385 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 CSPG5O95196 566 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 URODP06132 367 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 GALTP07902 379 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 SPATA31C1P0DKV0 1188 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 GLRA2P23416 452 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 IRS1P35568 1242 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 MTHFRP42898 656 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 ERVFC1P60507 584 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 MBTD1Q05BQ5 628 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 PTGDRQ13258 359 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 PRPF4BQ13523 1007 aaKnown RBP11.48□□□□□ -0.57
CDCA3-208ENST00000540683 CDCA2Q69YH5 1023 aaPredicted RBP11.48□□□□□ -0.57
CDCA3-208ENST00000540683 ANKRD54Q6NXT1 300 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 PDXDC1Q6P996 788 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 CYP26C1Q6V0L0 522 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 BRAPQ7Z569 592 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 ADGRD2Q7Z7M1 963 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
CDCA3-208ENST00000540683 SNX29Q8TEQ0 813 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 AK8Q96MA6 479 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 KIF2CQ99661 725 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 GBP3Q9H0R5 595 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 TMEM60Q9H2L4 133 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.48□□□□□ -0.57
CDCA3-208ENST00000540683 BMP2KQ9NSY1 1161 aaPredicted RBP11.48□□□□□ -0.57
CDCA3-208ENST00000540683 RYDENQ9NUL5 291 aaKnown RBP11.48□□□□□ -0.57
CDCA3-208ENST00000540683 RBM19Q9Y4C8 960 aaKnown RBP11.48□□□□□ -0.57
CDCA3-208ENST00000540683 IPPQ9Y573 584 aa11.48□□□□□ -0.57
CDCA3-208ENST00000540683 C2orf71A6NGG8 1288 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 ARL5CA6NH57 179 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 MED24O75448 989 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 PDIA4P13667 645 aaKnown RBP11.47□□□□□ -0.57
CDCA3-208ENST00000540683 ARF4P18085 180 aaPredicted RBP11.47□□□□□ -0.57
CDCA3-208ENST00000540683 SMTNP53814 917 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 ST3GAL1Q11201 340 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 ELAVL2Q12926 359 aaKnown RBP11.47□□□□□ -0.57
CDCA3-208ENST00000540683 GRIK3Q13003 919 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 DMP1Q13316 513 aaPredicted RBP11.47□□□□□ -0.57
CDCA3-208ENST00000540683 CBX2Q14781 532 aaPredicted RBP11.47□□□□□ -0.57
CDCA3-208ENST00000540683 KIAA1841Q6NSI8 718 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 AGMOQ6ZNB7 445 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 IGSF22Q8N9C0 903 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 LPPQ93052 612 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 TMX3Q96JJ7 454 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 ZBP1Q9H171 429 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 KCNH6Q9H252 994 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 MINDY3Q9H8M7 445 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 TOPORSQ9NS56 1045 aaPredicted RBP11.47□□□□□ -0.57
CDCA3-208ENST00000540683 CLEC1BQ9P126 229 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 USP15Q9Y4E8 981 aaPredicted RBP11.47□□□□□ -0.57
CDCA3-208ENST00000540683 ATG2AQ2TAZ0 1938 aa11.47□□□□□ -0.57
CDCA3-208ENST00000540683 ACKR2O00590 384 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 PER2O15055 1255 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 ZBTB39O15060 712 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 PRKCBP05771 671 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 ADH1AP07327 375 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 COL9A1P20849 921 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 GJB2P29033 226 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 YARSP54577 528 aaKnown RBP11.46□□□□□ -0.57
CDCA3-208ENST00000540683 CLUL1Q15846 466 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 ATAT1Q5SQI0 421 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 LARP1BQ659C4 914 aaKnown RBP11.46□□□□□ -0.57
CDCA3-208ENST00000540683 POTEGQ6S5H5 508 aa11.46□□□□□ -0.57
CDCA3-208ENST00000540683 ASAP3Q8TDY4 903 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms