RNA–Protein interactions for RNA: ENST00000540581.5

CACFD1-206, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CACFD1, Length 2,880 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-206ENST00000540581 ABCF3Q9NUQ8 709 aa17.13■□□□□ 0.33
CACFD1-206ENST00000540581 SAMD15Q9P1V8 674 aa17.13■□□□□ 0.33
CACFD1-206ENST00000540581 MTRF1LQ9UGC7 380 aaKnown RBP17.13■□□□□ 0.33
CACFD1-206ENST00000540581 CCT8L1PA6NM43 557 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 TCP10L2B9ZVM9 353 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 POLRMTO00411 1230 aaKnown RBP17.12■□□□□ 0.33
CACFD1-206ENST00000540581 EIF3DO15371 548 aaKnown RBP eCLIP17.12■□□□□ 0.33
CACFD1-206ENST00000540581 TOM1O60784 492 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 CCDC172P0C7W6 258 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 RARAP10276 462 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 GPC5P78333 572 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 NOP9Q86U38 636 aaKnown RBP17.12■□□□□ 0.33
CACFD1-206ENST00000540581 DHX38Q92620 1227 aaKnown RBP17.12■□□□□ 0.33
CACFD1-206ENST00000540581 MKL1Q969V6 931 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 ZNF653Q96CK0 615 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 SGSM3Q96HU1 749 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 CRAMP1Q96RY5 1269 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 KIFC3Q9BVG8 833 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 NUP85Q9BW27 656 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 CNOT10Q9H9A5 744 aaKnown RBP17.12■□□□□ 0.33
CACFD1-206ENST00000540581 FBXO28Q9NVF7 368 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 CLRN2A0PK11 232 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 PSMD10O75832 226 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 VAMP7P51809 220 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 HHIPL2Q6UWX4 724 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 ANKS4BQ8N8V4 417 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 ATXN2LQ8WWM7 1075 aaKnown RBP17.12■□□□□ 0.33
CACFD1-206ENST00000540581 CSRNP1Q96S65 589 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 YY1AP1Q9H869 796 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 ASIC3Q9UHC3 531 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 TRPC6Q9Y210 931 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 BTAF1O14981 1849 aa17.12■□□□□ 0.33
CACFD1-206ENST00000540581 PADI6Q6TGC4 694 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 PRUNE1Q86TP1 453 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 DAW1Q8N136 415 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 PLEKHO2Q8TD55 490 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 N4BP2L2Q92802 583 aaPredicted RBP17.11■□□□□ 0.33
CACFD1-206ENST00000540581 ZNF317Q96PQ6 595 aaPredicted RBP17.11■□□□□ 0.33
CACFD1-206ENST00000540581 TRIM7Q9C029 511 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 C5orf60A6NFR6 353 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 FAM187AA6NFU0 413 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 CIITAP33076 1130 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 DHX34Q14147 1143 aaKnown RBP17.11■□□□□ 0.33
CACFD1-206ENST00000540581 KIF2BQ8N4N8 673 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 NACC1Q96RE7 527 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 ADAM33Q9BZ11 813 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 TMX4Q9H1E5 349 aaPredicted RBP17.11■□□□□ 0.33
CACFD1-206ENST00000540581 TOPORSQ9NS56 1045 aaPredicted RBP17.11■□□□□ 0.33
CACFD1-206ENST00000540581 FGFR1OP2Q9NVK5 253 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 ODF2LQ9ULJ1 636 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 FRMPD4Q14CM0 1322 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 SLC16A4O15374 487 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 RIPK2O43353 540 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 PAEPP09466 180 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 POLR2MP0CAP2 368 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 ANXA13P27216 316 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 HOXA10P31260 410 aaPredicted RBP17.11■□□□□ 0.33
CACFD1-206ENST00000540581 NF2P35240 595 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 STAT2P52630 851 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 RHOT2Q8IXI1 618 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 LMO3Q8TAP4 145 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 HEMGNQ9BXL5 484 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 HOMER2Q9NSB8 354 aa17.11■□□□□ 0.33
CACFD1-206ENST00000540581 TTC7AQ9ULT0 858 aaPredicted RBP17.11■□□□□ 0.33
CACFD1-206ENST00000540581 SYNGAP1Q96PV0 1343 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 CYP3A4P08684 503 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 CHRNA3P32297 505 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 CHKAP35790 457 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 MMP13P45452 471 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 STXBP4Q6ZWJ1 553 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 ZNF564Q8TBZ8 553 aaPredicted RBP17.1■□□□□ 0.33
CACFD1-206ENST00000540581 GEMIN8Q9NWZ8 242 aaKnown RBP17.1■□□□□ 0.33
CACFD1-206ENST00000540581 TCP11X1B4DZS4 312 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 IPO5O00410 1097 aaKnown RBP17.1■□□□□ 0.33
CACFD1-206ENST00000540581 COILP38432 576 aaPredicted RBP17.1■□□□□ 0.33
CACFD1-206ENST00000540581 CALCOCO2Q13137 446 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 AUHQ13825 339 aaKnown RBP17.1■□□□□ 0.33
CACFD1-206ENST00000540581 KIF22Q14807 665 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 GRIPAP1Q4V328 841 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 CEP55Q53EZ4 464 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 CCDC63Q8NA47 563 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 MRRFQ96E11 262 aaKnown RBP17.1■□□□□ 0.33
CACFD1-206ENST00000540581 PAIP2Q9BPZ3 127 aaKnown RBP17.1■□□□□ 0.33
CACFD1-206ENST00000540581 TUFT1Q9NNX1 390 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.1■□□□□ 0.33
CACFD1-206ENST00000540581 GGA2Q9UJY4 613 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 AGAP1Q9UPQ3 857 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 STK38LQ9Y2H1 464 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 L3MBTL1Q9Y468 752 aa17.1■□□□□ 0.33
CACFD1-206ENST00000540581 LTBP4Q8N2S1 1624 aa17.09■□□□□ 0.33
CACFD1-206ENST00000540581 CETN1Q12798 172 aa17.09■□□□□ 0.33
CACFD1-206ENST00000540581 PLCB4Q15147 1175 aa17.09■□□□□ 0.33
CACFD1-206ENST00000540581 ACCSLQ4AC99 568 aa17.09■□□□□ 0.33
CACFD1-206ENST00000540581 HP1BP3Q5SSJ5 553 aaPredicted RBP17.09■□□□□ 0.33
CACFD1-206ENST00000540581 PI4K2AQ9BTU6 479 aa17.09■□□□□ 0.33
CACFD1-206ENST00000540581 DMAC2Q9NW81 257 aa17.09■□□□□ 0.33
CACFD1-206ENST00000540581 GH1P01241 217 aa17.09■□□□□ 0.33
CACFD1-206ENST00000540581 NUDT17P0C025 328 aa17.09■□□□□ 0.33
CACFD1-206ENST00000540581 KRT5P13647 590 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms