RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 TRAF3IP3Q9Y228 551 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 STK38LQ9Y2H1 464 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 ADAMTS7Q9UKP4 1686 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 ZNF233A6NK53 670 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 CSDE1O75534 798 aaKnown RBP10.62□□□□□ -0.71
PHC1-208ENST00000540574 GJB6O95452 261 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 NR3C2P08235 984 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 IRX3P78415 501 aaPredicted RBP10.62□□□□□ -0.71
PHC1-208ENST00000540574 Q4G0T1 1027 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 FAM133BQ5BKY9 247 aaKnown RBP10.62□□□□□ -0.71
PHC1-208ENST00000540574 PHLDB3Q6NSJ2 640 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 CACNA2D3Q8IZS8 1091 aa10.62□□□□□ -0.71
PHC1-208ENST00000540574 WRAP73Q9P2S5 460 aaPredicted RBP10.62□□□□□ -0.71
PHC1-208ENST00000540574 CCDC188H7C350 402 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 WNT10BO00744 389 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 GAS8O95995 478 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 FLT3P36888 993 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 CLK2P49760 499 aaKnown RBP10.61□□□□□ -0.71
PHC1-208ENST00000540574 PSMC5P62195 406 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 KRT39Q6A163 491 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 C1orf186Q6ZWK4 172 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 ANKS4BQ8N8V4 417 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 FBXO25Q8TCJ0 367 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 TATDN2Q93075 761 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 MSTO1Q9BUK6 570 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 ZNRF3Q9ULT6 936 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 NR2E1Q9Y466 385 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 ECEL1O95672 775 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 E2F5Q15329 346 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 ZCWPW2Q504Y3 356 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 TTMPQ5BVD1 217 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 SCYL2Q6P3W7 929 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 AENQ8WTP8 325 aaKnown RBP10.61□□□□□ -0.71
PHC1-208ENST00000540574 ELAC2Q9BQ52 826 aaKnown RBP10.61□□□□□ -0.71
PHC1-208ENST00000540574 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
PHC1-208ENST00000540574 DEFB129Q9H1M3 183 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 MYOZ2Q9NPC6 264 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 CEP83Q9Y592 693 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 PCDHA10Q9Y5I2 948 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 IGKV6D-41A0A0C4DH26 115 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 LSP1P33241 339 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 RARRES1P49788 294 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 ORC1Q13415 861 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 SLC15A2Q16348 729 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 FAM182AQ5T1J6 154 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 FBXL13Q8NEE6 735 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 LNX1Q8TBB1 728 aaPredicted RBP10.61□□□□□ -0.71
PHC1-208ENST00000540574 ADAM22Q9P0K1 906 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 SEL1LQ9UBV2 794 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 CLEC11AQ9Y240 323 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 PASKQ96RG2 1323 aa10.61□□□□□ -0.71
PHC1-208ENST00000540574 WDR91A4D1P6 747 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 EIF3HO15372 352 aaKnown RBP eCLIP10.6□□□□□ -0.71
PHC1-208ENST00000540574 EDIL3O43854 480 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 CLTAP09496 248 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 SCP2P22307 547 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 RWDD2BP57060 319 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 GRM1Q13255 1194 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 CUL1Q13616 776 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 GKAP1Q5VSY0 366 aaPredicted RBP10.6□□□□□ -0.71
PHC1-208ENST00000540574 CPNE8Q86YQ8 564 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 RHOT2Q8IXI1 618 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 TBC1D31Q96DN5 1066 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 C9orf72Q96LT7 481 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 CCDC77Q9BR77 488 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 TMEM117Q9H0C3 514 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 PIM2Q9P1W9 311 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 CNOT7Q9UIV1 285 aaKnown RBP10.6□□□□□ -0.71
PHC1-208ENST00000540574 RASGRF2O14827 1237 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 PPP1R37O75864 691 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 TMEM191BP0C7N4 346 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 PLS3P13797 630 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 ATF2P15336 505 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 CCND2P30279 289 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 BAG6P46379 1132 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 SLC29A2Q14542 456 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 LONRF1Q17RB8 773 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 DALRD3Q5D0E6 543 aaKnown RBP10.6□□□□□ -0.71
PHC1-208ENST00000540574 FMNL3Q8IVF7 1028 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 GMCL1P1Q8NEA9 526 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 MKL1Q969V6 931 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 HSD17B14Q9BPX1 270 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 TARS2Q9BW92 718 aaKnown RBP10.6□□□□□ -0.71
PHC1-208ENST00000540574 ZWILCHQ9H900 591 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 TBC1D22BQ9NU19 505 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 VAV3Q9UKW4 847 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 CACNA1SQ13698 1873 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 ASTN2O75129 1339 aaPredicted RBP10.6□□□□□ -0.71
PHC1-208ENST00000540574 LRRD1A4D1F6 860 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 ANKRD63C9JTQ0 380 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 SLC16A3O15427 465 aaKnown RBP10.6□□□□□ -0.71
PHC1-208ENST00000540574 PSMD10O75832 226 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 PMS2P54278 862 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 ANGEL2Q5VTE6 544 aaKnown RBP10.6□□□□□ -0.71
PHC1-208ENST00000540574 FAM47EQ6ZV65 393 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 NLRP14Q86W24 1093 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 JAMLQ86YT9 394 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 TCP11Q8WWU5 503 aa10.6□□□□□ -0.71
PHC1-208ENST00000540574 SYN2Q92777 582 aaPredicted RBP10.6□□□□□ -0.71
PHC1-208ENST00000540574 CCT8L2Q96SF2 557 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms