RNA–Protein interactions for RNA: ENST00000540554.1

FERMT3-203, Transcript of fermitin family member 3, humanhuman

TSL 3

Gene FERMT3, Length 379 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-203ENST00000540554 NEFLP07196 543 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 HOXA11P31270 313 aaPredicted RBP19.22■□□□□ 0.67
FERMT3-203ENST00000540554 OR1G1P47890 313 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 AK2P54819 239 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 SPIRE1Q08AE8 756 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 NCBP1Q09161 790 aaKnown RBP19.22■□□□□ 0.67
FERMT3-203ENST00000540554 MXD4Q14582 209 aaPredicted RBP19.22■□□□□ 0.67
FERMT3-203ENST00000540554 CALCRLQ16602 461 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 NOTUMQ6P988 496 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 CCDC149Q6ZUS6 474 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 PLCD3Q8N3E9 789 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 NECAB1Q8N987 351 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 EIF2AQ9BY44 585 aaKnown RBP19.22■□□□□ 0.67
FERMT3-203ENST00000540554 TRIM6Q9C030 488 aaPredicted RBP19.22■□□□□ 0.67
FERMT3-203ENST00000540554 UBN1Q9NPG3 1134 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 IPPQ9Y573 584 aa19.22■□□□□ 0.67
FERMT3-203ENST00000540554 CACNA1HO95180 2353 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 CITO14578 2027 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 TSPAN1O60635 241 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 CNPP09543 421 aaKnown RBP19.21■□□□□ 0.67
FERMT3-203ENST00000540554 AXLP30530 894 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 MLH1P40692 756 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 ZDHHC14Q8IZN3 488 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 SMG8Q8ND04 991 aaKnown RBP19.21■□□□□ 0.67
FERMT3-203ENST00000540554 FEZF2Q8TBJ5 459 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 ATOH1Q92858 354 aaPredicted RBP19.21■□□□□ 0.67
FERMT3-203ENST00000540554 ACSF2Q96CM8 615 aaPredicted RBP19.21■□□□□ 0.67
FERMT3-203ENST00000540554 GAD1Q99259 594 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 EIF2AK1Q9BQI3 630 aaKnown RBP19.21■□□□□ 0.67
FERMT3-203ENST00000540554 HERC2P3Q9BVR0 1158 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 MFSD1Q9H3U5 465 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 XPNPEP1Q9NQW7 623 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 PCDHA12Q9UN75 941 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 HES2Q9Y543 173 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 MIA3Q5JRA6 1907 aa19.21■□□□□ 0.67
FERMT3-203ENST00000540554 SOD2P04179 222 aa19.2■□□□□ 0.66
FERMT3-203ENST00000540554 CLCN4P51793 760 aa19.2■□□□□ 0.66
FERMT3-203ENST00000540554 PTENP60484 403 aa19.2■□□□□ 0.66
FERMT3-203ENST00000540554 CCDC51Q96ER9 411 aa19.2■□□□□ 0.66
FERMT3-203ENST00000540554 IRF2BPLQ9H1B7 796 aa19.2■□□□□ 0.66
FERMT3-203ENST00000540554 MAN1C1Q9NR34 630 aa19.2■□□□□ 0.66
FERMT3-203ENST00000540554 USTQ9Y2C2 406 aa19.2■□□□□ 0.66
FERMT3-203ENST00000540554 ARL5CA6NH57 179 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 NEMFO60524 1076 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 DGAT1O75907 488 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 SLITRK3O94933 977 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 LARGE1O95461 756 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 GLUD2P49448 558 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 SCNN1GP51170 649 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 CAPSQ13938 189 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 TRIM29Q14134 588 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 PCBP1Q15365 356 aaKnown RBP eCLIP19.19■□□□□ 0.66
FERMT3-203ENST00000540554 ELMSAN1Q6PJG2 1045 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 GPR149Q86SP6 731 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 HACE1Q8IYU2 909 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 ASAP3Q8TDY4 903 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 ZFP42Q96MM3 310 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 CSRNP2Q9H175 543 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 TTC12Q9H892 705 aaPredicted RBP19.19■□□□□ 0.66
FERMT3-203ENST00000540554 MARCH5Q9NX47 278 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 SSX2IPQ9Y2D8 614 aa19.19■□□□□ 0.66
FERMT3-203ENST00000540554 NR1I2O75469 434 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 ADH1AP07327 375 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 MYBP10242 640 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 FDPSP14324 419 aaKnown RBP19.18■□□□□ 0.66
FERMT3-203ENST00000540554 TXKP42681 527 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 ANAPC15P60006 121 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 MBTD1Q05BQ5 628 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 OTOP3Q7RTS5 596 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 COLGALT2Q8IYK4 626 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 TNFRSF25Q93038 417 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 GTF3C6Q969F1 213 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 POLR3FQ9H1D9 316 aaPredicted RBP19.18■□□□□ 0.66
FERMT3-203ENST00000540554 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 NXF3Q9H4D5 531 aaKnown RBP19.18■□□□□ 0.66
FERMT3-203ENST00000540554 ANKEF1Q9NU02 776 aa19.18■□□□□ 0.66
FERMT3-203ENST00000540554 H0Y858 1186 aa19.17■□□□□ 0.66
FERMT3-203ENST00000540554 USO1O60763 962 aaKnown RBP19.17■□□□□ 0.66
FERMT3-203ENST00000540554 NPTXRO95502 500 aa19.17■□□□□ 0.66
FERMT3-203ENST00000540554 GLUD1P00367 558 aa19.17■□□□□ 0.66
FERMT3-203ENST00000540554 ARF4P18085 180 aaPredicted RBP19.17■□□□□ 0.66
FERMT3-203ENST00000540554 ME3Q16798 604 aa19.17■□□□□ 0.66
FERMT3-203ENST00000540554 CDR2LQ86X02 465 aaPredicted RBP19.17■□□□□ 0.66
FERMT3-203ENST00000540554 DIS3L2Q8IYB7 885 aaKnown RBP19.17■□□□□ 0.66
FERMT3-203ENST00000540554 RPS6KC1Q96S38 1066 aa19.17■□□□□ 0.66
FERMT3-203ENST00000540554 POTEMA6NI47 508 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 LRRIQ4A6NIV6 560 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 BTBD18B2RXH4 712 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 B4GALT5O43286 388 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 GALR2O43603 387 aaPredicted RBP19.16■□□□□ 0.66
FERMT3-203ENST00000540554 GFRA3O60609 400 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 LYPLA2O95372 231 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 DSC1Q08554 894 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 MAEAQ7L5Y9 396 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 TAS1R1Q7RTX1 841 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 IFNLR1Q8IU57 520 aaPredicted RBP19.16■□□□□ 0.66
FERMT3-203ENST00000540554 TMEM105Q8N8V8 129 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 NSUN7Q8NE18 718 aaKnown RBP19.16■□□□□ 0.66
FERMT3-203ENST00000540554 PIGOQ8TEQ8 1089 aa19.16■□□□□ 0.66
FERMT3-203ENST00000540554 COLEC11Q9BWP8 271 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms