RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 MSL3Q8N5Y2 521 aaKnown RBP11.78□□□□□ -0.52
PBX1-212ENST00000540236 GFAPP14136 432 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 SAT1P21673 171 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 STAT1P42224 750 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 RUNDC3BQ96NL0 473 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 SSX2IPQ9Y2D8 614 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 LOC100653049A0A140TA62 436 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 KRT34O76011 436 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 MAN1A1P33908 653 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 NCOA4Q13772 614 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 ANKRD20A4Q4UJ75 823 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 C6orf89Q6UWU4 347 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 SLC35G2Q8TBE7 412 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 GJA10Q969M2 543 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 LIN28AQ9H9Z2 209 aaKnown RBP11.78□□□□□ -0.52
PBX1-212ENST00000540236 PCDH12Q9NPG4 1184 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 PKD2L1Q9P0L9 805 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 KNDC1Q76NI1 1749 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 SH3TC1Q8TE82 1336 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 GCNT4Q9P109 453 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 WARS2Q9UGM6 360 aaKnown RBP11.78□□□□□ -0.52
PBX1-212ENST00000540236 ITM2BQ9Y287 266 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 NMT2O60551 498 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 UNC5CO95185 931 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 LYNP07948 512 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 CSE1LP55060 971 aaKnown RBP11.78□□□□□ -0.52
PBX1-212ENST00000540236 TRIM25Q14258 630 aaKnown RBP11.78□□□□□ -0.52
PBX1-212ENST00000540236 KRT81Q14533 505 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 PERM1Q5SV97 790 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 SESTD1Q86VW0 696 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 APLFQ8IW19 511 aaPredicted RBP11.78□□□□□ -0.52
PBX1-212ENST00000540236 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
PBX1-212ENST00000540236 STKLD1Q8NE28 680 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 FBXO25Q8TCJ0 367 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 FAM89AQ96GI7 184 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 MAGEB18Q96M61 343 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 SPATA16Q9BXB7 569 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 FAM192AQ9GZU8 254 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 EBF3Q9H4W6 596 aa11.78□□□□□ -0.52
PBX1-212ENST00000540236 TNKSO95271 1327 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 PDS5AQ29RF7 1337 aaKnown RBP11.77□□□□□ -0.52
PBX1-212ENST00000540236 TBC1D12O60347 775 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 FGFR3P22607 806 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 PTPN4P29074 926 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 AP1B1Q10567 949 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 DCTN2Q13561 401 aaKnown RBP11.77□□□□□ -0.52
PBX1-212ENST00000540236 CALCRLQ16602 461 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 EML3Q32P44 896 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 CDKAL1Q5VV42 579 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 MTBPQ96DY7 904 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 ZFYVE19Q96K21 471 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 CEP295NLQ96MC4 621 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 AGBL1Q96MI9 1066 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 ECSITQ9BQ95 431 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 DENND2DQ9H6A0 471 aaPredicted RBP11.77□□□□□ -0.52
PBX1-212ENST00000540236 COMMD3-BMI1R4GMX3 469 aa11.77□□□□□ -0.52
PBX1-212ENST00000540236 ESCO1Q5FWF5 840 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 ZBED8Q8IZ13 594 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 ZNF444Q8N0Y2 327 aaPredicted RBP11.77□□□□□ -0.53
PBX1-212ENST00000540236 ASAP3Q8TDY4 903 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 DACT3Q96B18 629 aaPredicted RBP11.77□□□□□ -0.53
PBX1-212ENST00000540236 OMA1Q96E52 524 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 AASDHPPTQ9NRN7 309 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 ANKFY1Q9P2R3 1169 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 COL4A3BPQ9Y5P4 624 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 MEIS1O00470 390 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 CAPN1P07384 714 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 ARL6IP4Q66PJ3 421 aaKnown RBP11.77□□□□□ -0.53
PBX1-212ENST00000540236 GPBP1Q86WP2 473 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 ANKLE2Q86XL3 938 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 BLIDQ8IZY5 108 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 TMEM120AQ9BXJ8 343 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 LY9Q9HBG7 655 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 NIP7Q9Y221 180 aaKnown RBP eCLIP11.77□□□□□ -0.53
PBX1-212ENST00000540236 ATP11BQ9Y2G3 1177 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 DUOX2Q9NRD8 1548 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 MYOCOSA0A1B0GUC4 107 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 LPXNO60711 386 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 MT-ND3P03897 115 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 CREB1P16220 341 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 LMNB1P20700 586 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 PDE1BQ01064 536 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 NLRP10Q86W26 655 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.77□□□□□ -0.53
PBX1-212ENST00000540236 TMTC2Q8N394 836 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 ZNF713Q8N859 430 aaPredicted RBP11.77□□□□□ -0.53
PBX1-212ENST00000540236 FBXO9Q9UK97 447 aaPredicted RBP11.77□□□□□ -0.53
PBX1-212ENST00000540236 C1orf232A0A0U1RR37 186 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 F8W031 263 aaPredicted RBP11.77□□□□□ -0.53
PBX1-212ENST00000540236 XRCC5P13010 732 aaKnown RBP11.77□□□□□ -0.53
PBX1-212ENST00000540236 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.77□□□□□ -0.53
PBX1-212ENST00000540236 ARMC7Q9H6L4 198 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 SLCO1B3Q9NPD5 702 aa11.77□□□□□ -0.53
PBX1-212ENST00000540236 MADDQ8WXG6 1647 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 FANCAO15360 1455 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 EPHB6O15197 1021 aa11.76□□□□□ -0.53
PBX1-212ENST00000540236 RAP1GDS1P52306 607 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms