RNA–Protein interactions for RNA: ENST00000539813.1

LINC00273-201, long intergenic non-protein coding RNA 273, humanhuman

BASIC

Gene LINC00273, Length 1,452 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00273-201ENST00000539813 ZNF623O75123 536 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 PIGRP01833 764 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 SKIP12755 728 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 MCM4P33991 863 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 PSMD2Q13200 908 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 KCNB1Q14721 858 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 L1TD1Q5T7N2 865 aaKnown RBP28.4■■■□□ 2.14
LINC00273-201ENST00000539813 ZPBP2Q6X784 338 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 STXBP4Q6ZWJ1 553 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 NPAS4Q8IUM7 802 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 HERC6Q8IVU3 1022 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 SPATA20Q8TB22 786 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 CCDC47Q96A33 483 aaKnown RBP28.4■■■□□ 2.14
LINC00273-201ENST00000539813 TARS2Q9BW92 718 aaKnown RBP28.4■■■□□ 2.14
LINC00273-201ENST00000539813 RHOBTB3O94955 611 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 EPM2AIP1Q7L775 607 aaPredicted RBP28.4■■■□□ 2.14
LINC00273-201ENST00000539813 ZNF598Q86UK7 904 aaKnown RBP28.4■■■□□ 2.14
LINC00273-201ENST00000539813 CDR2LQ86X02 465 aaPredicted RBP28.4■■■□□ 2.14
LINC00273-201ENST00000539813 EIF2AQ9BY44 585 aaKnown RBP28.4■■■□□ 2.14
LINC00273-201ENST00000539813 PTPRHQ9HD43 1115 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 TMEM161AQ9NX61 479 aa28.4■■■□□ 2.14
LINC00273-201ENST00000539813 EIF3DO15371 548 aaKnown RBP eCLIP28.39■■■□□ 2.13
LINC00273-201ENST00000539813 GJB5O95377 273 aa28.39■■■□□ 2.13
LINC00273-201ENST00000539813 STAG3L1P0CL83 205 aa28.39■■■□□ 2.13
LINC00273-201ENST00000539813 ATF7P17544 494 aaPredicted RBP28.39■■■□□ 2.13
LINC00273-201ENST00000539813 PROZP22891 400 aa28.39■■■□□ 2.13
LINC00273-201ENST00000539813 GLIS3Q8NEA6 775 aa28.39■■■□□ 2.13
LINC00273-201ENST00000539813 ADPGKQ9BRR6 497 aa28.39■■■□□ 2.13
LINC00273-201ENST00000539813 PCDHB7Q9Y5E2 793 aa28.39■■■□□ 2.13
LINC00273-201ENST00000539813 PCDHB2Q9Y5E7 798 aa28.39■■■□□ 2.13
LINC00273-201ENST00000539813 TRIOBPQ9H2D6 2365 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 UBE4BO95155 1302 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.38■■■□□ 2.13
LINC00273-201ENST00000539813 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.38■■■□□ 2.13
LINC00273-201ENST00000539813 SMC2O95347 1197 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 EOMESO95936 686 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 LRIT3Q3SXY7 679 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 EEF1DP3Q658K8 133 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 FAM109BQ6ICB4 259 aaPredicted RBP28.38■■■□□ 2.13
LINC00273-201ENST00000539813 TMCO2Q7Z6W1 182 aaPredicted RBP28.38■■■□□ 2.13
LINC00273-201ENST00000539813 MRPL10Q7Z7H8 261 aaKnown RBP28.38■■■□□ 2.13
LINC00273-201ENST00000539813 GPT2Q8TD30 523 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 BICD1Q96G01 975 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 GSDMAQ96QA5 445 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 ACCSQ96QU6 501 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 SLC39A2Q9NP94 309 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 LRFN2Q9ULH4 789 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 LAMA3Q16787 3333 aa28.38■■■□□ 2.13
LINC00273-201ENST00000539813 COL4A6Q14031 1691 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 ABLIM1O14639 778 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 HNRNPDLO14979 420 aaKnown RBP28.37■■■□□ 2.13
LINC00273-201ENST00000539813 TOM1L1O75674 476 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 UPP2O95045 317 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 NPTXRO95502 500 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 STK4Q13043 487 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 DCAF4L1Q3SXM0 396 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 KIAA0895Q8NCT3 520 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 SMARCE1Q969G3 411 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 TRIM6Q9C030 488 aaPredicted RBP28.37■■■□□ 2.13
LINC00273-201ENST00000539813 EXOC7Q9UPT5 735 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 PCDHA5Q9Y5H7 936 aa28.37■■■□□ 2.13
LINC00273-201ENST00000539813 PRPF6O94906 941 aaKnown RBP28.36■■■□□ 2.13
LINC00273-201ENST00000539813 LIG4P49917 911 aa28.36■■■□□ 2.13
LINC00273-201ENST00000539813 KCNA1Q09470 495 aa28.36■■■□□ 2.13
LINC00273-201ENST00000539813 MPZL3Q6UWV2 235 aa28.36■■■□□ 2.13
LINC00273-201ENST00000539813 APBB1IPQ7Z5R6 666 aaPredicted RBP28.36■■■□□ 2.13
LINC00273-201ENST00000539813 SMG8Q8ND04 991 aaKnown RBP28.36■■■□□ 2.13
LINC00273-201ENST00000539813 ZNF507Q8TCN5 953 aa28.36■■■□□ 2.13
LINC00273-201ENST00000539813 RMND1Q9NWS8 449 aa28.36■■■□□ 2.13
LINC00273-201ENST00000539813 IPPQ9Y573 584 aa28.36■■■□□ 2.13
LINC00273-201ENST00000539813 MBD3O95983 291 aa28.35■■■□□ 2.13
LINC00273-201ENST00000539813 HTRA4P83105 476 aaPredicted RBP28.35■■■□□ 2.13
LINC00273-201ENST00000539813 ZNF568Q3ZCX4 644 aa28.35■■■□□ 2.13
LINC00273-201ENST00000539813 SCFD1Q8WVM8 642 aa28.35■■■□□ 2.13
LINC00273-201ENST00000539813 ERCC4Q92889 916 aaPredicted RBP28.35■■■□□ 2.13
LINC00273-201ENST00000539813 CLSTN2Q9H4D0 955 aa28.35■■■□□ 2.13
LINC00273-201ENST00000539813 TMEM206Q9H813 350 aa28.35■■■□□ 2.13
LINC00273-201ENST00000539813 CITO14578 2027 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 GRXCR1A8MXD5 290 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 DGKIO75912 1065 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 IBSPP21815 317 aaPredicted RBP28.34■■■□□ 2.13
LINC00273-201ENST00000539813 BMT2Q1RMZ1 405 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 FAM117BQ6P1L5 589 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 SLC39A4Q6P5W5 647 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 PGBD4Q96DM1 585 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 ZBED2Q9BTP6 218 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 CDT1Q9H211 546 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 RC3H2Q9HBD1 1191 aaKnown RBP28.34■■■□□ 2.13
LINC00273-201ENST00000539813 MCF2P10911 925 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 SMAD3P84022 425 aaKnown RBP28.34■■■□□ 2.13
LINC00273-201ENST00000539813 NOLC1Q14978 699 aaKnown RBP eCLIP28.34■■■□□ 2.13
LINC00273-201ENST00000539813 ZBTB45Q96K62 511 aaPredicted RBP28.34■■■□□ 2.13
LINC00273-201ENST00000539813 RAD9AQ99638 391 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 NXF3Q9H4D5 531 aaKnown RBP28.34■■■□□ 2.13
LINC00273-201ENST00000539813 RNF19AQ9NV58 838 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 ANKFY1Q9P2R3 1169 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 PCDHA11Q9Y5I1 949 aa28.34■■■□□ 2.13
LINC00273-201ENST00000539813 CLDN3O15551 220 aa28.33■■■□□ 2.13
LINC00273-201ENST00000539813 HOXA2O43364 376 aa28.33■■■□□ 2.13
LINC00273-201ENST00000539813 TLL1O43897 1013 aa28.33■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms