RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 IPO7O95373 1038 aaKnown RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 EIF4BP23588 611 aaKnown RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 CCND3P30281 292 aaPredicted RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 RAB27AP51159 221 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 CYP2J2P51589 502 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 GPC3P51654 580 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 CLCN3P51790 818 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 CASP5P51878 434 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 BEX3Q00994 111 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 BFSP1Q12934 665 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 NR1I3Q14994 352 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 SNRNP35Q16560 246 aaKnown RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 NBPF20Q3BBV1 942 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 ZC2HC1CQ53FD0 456 aaPredicted RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 ATF7IP2Q5U623 682 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 CXCL17Q6UXB2 119 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 GBP6Q6ZN66 633 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 CATSPER4Q7RTX7 472 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 SERINC5Q86VE9 423 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 VSTM4Q8IW00 320 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 TRIM59Q8IWR1 403 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 KIAA0319LQ8IZA0 1049 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 LRRC71Q8N4P6 559 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 NEK11Q8NG66 645 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 ASAP3Q8TDY4 903 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 CACTINQ8WUQ7 758 aaKnown RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 HPS3Q969F9 1004 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 ERGIC2Q96RQ1 377 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 CCDC94Q9BW85 323 aaPredicted RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 TRIM6Q9C030 488 aaPredicted RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 RNF208Q9H0X6 261 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 FAM124BQ9H5Z6 455 aaPredicted RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 LUC7LQ9NQ29 371 aaKnown RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 PAK6Q9NQU5 681 aaPredicted RBP12.84□□□□□ -0.35
VTN-202ENST00000539746 HDAC6Q9UBN7 1215 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 MYO6Q9UM54 1294 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 TRPV2Q9Y5S1 764 aa12.84□□□□□ -0.35
VTN-202ENST00000539746 MCM3APO60318 1980 aa12.83□□□□□ -0.35
VTN-202ENST00000539746 ARID2Q68CP9 1835 aa12.83□□□□□ -0.35
VTN-202ENST00000539746 A0A1W2PQJ5 194 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 TGFB1I1O43294 461 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 ZC3H11AO75152 810 aaKnown RBP eCLIP12.83□□□□□ -0.36
VTN-202ENST00000539746 PAX3P23760 479 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 VAMP7P51809 220 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 NLRP11P59045 1033 aaKnown RBP12.83□□□□□ -0.36
VTN-202ENST00000539746 ADAM17P78536 824 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 MRPS6P82932 125 aaKnown RBP12.83□□□□□ -0.36
VTN-202ENST00000539746 MCL1Q07820 350 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 PTGISQ16647 500 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 ZNF568Q3ZCX4 644 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 DCAF17Q5H9S7 520 aaPredicted RBP12.83□□□□□ -0.36
VTN-202ENST00000539746 ENOSF1Q7L5Y1 443 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 FAXDC2Q96IV6 333 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 FBXL18Q96ME1 805 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 SH2D3AQ9BRG2 576 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 CCDC113Q9H0I3 377 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 PLEKHA5Q9HAU0 1116 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 UBN1Q9NPG3 1134 aa12.83□□□□□ -0.36
VTN-202ENST00000539746 ZMYM2Q9UBW7 1377 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 A0A0B4J269 797 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 CARNS1A5YM72 827 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 GJB1P08034 283 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 CLTAP09496 248 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 ATP1A3P13637 1013 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 DARSP14868 501 aaKnown RBP12.82□□□□□ -0.36
VTN-202ENST00000539746 ZSCAN20P17040 1043 aaPredicted RBP12.82□□□□□ -0.36
VTN-202ENST00000539746 HTRA3P83110 453 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 MBTD1Q05BQ5 628 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 EXOC3L4Q17RC7 722 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 CCSAPQ6IQ19 270 aaPredicted RBP12.82□□□□□ -0.36
VTN-202ENST00000539746 SLC27A1Q6PCB7 646 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 CACNA2D4Q7Z3S7 1137 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 VPS36Q86VN1 386 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 TTC39CQ8N584 583 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 BSNDQ8WZ55 320 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 ARMC5Q96C12 935 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 ACO2Q99798 780 aaKnown RBP12.82□□□□□ -0.36
VTN-202ENST00000539746 CELF4Q9BZC1 486 aaKnown RBP12.82□□□□□ -0.36
VTN-202ENST00000539746 FAM49AQ9H0Q0 323 aaPredicted RBP12.82□□□□□ -0.36
VTN-202ENST00000539746 VPS16Q9H269 839 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 ASB7Q9H672 318 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 TAB2Q9NYJ8 693 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 ANKFY1Q9P2R3 1169 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 FBXL5Q9UKA1 691 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 OGDHLQ9ULD0 1010 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 DERAQ9Y315 318 aa12.82□□□□□ -0.36
VTN-202ENST00000539746 LUC7L2Q9Y383 392 aaKnown RBP12.82□□□□□ -0.36
VTN-202ENST00000539746 BZW2Q9Y6E2 419 aaKnown RBP12.82□□□□□ -0.36
VTN-202ENST00000539746 A0A087WZ62 844 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 DCDC2CA8MYV0 355 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 AKR1B15C9JRZ8 316 aaPredicted RBP12.81□□□□□ -0.36
VTN-202ENST00000539746 ARVCFO00192 962 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 ADCY6O43306 1168 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 AKAP3O75969 853 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 TFRCP02786 760 aaKnown RBP12.81□□□□□ -0.36
VTN-202ENST00000539746 CCL5P13501 91 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 P4HA1P13674 534 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 ANXA13P27216 316 aa12.81□□□□□ -0.36
VTN-202ENST00000539746 PMS1P54277 932 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms