RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 ENPP1P22413 925 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 KRTAP5-9P26371 169 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 IL6STP40189 918 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CASP2P42575 452 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 NCKAP1LP55160 1127 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ARL4CP56559 192 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 MAP3K12Q12852 859 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SEMA5AQ13591 1074 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 IL10RAQ13651 578 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 POLD3Q15054 466 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TOR2AQ5JU69 321 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TTC38Q5R3I4 469 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 KSR2Q6VAB6 950 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SEM1Q6ZVN7 128 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 GAREM2Q75VX8 874 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CILP2Q8IUL8 1156 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 DNAJC5GQ8N7S2 189 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 DEPTORQ8TB45 409 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 BCAS4Q8TDM0 211 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 DIS3LQ8TF46 1054 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ERCC4Q92889 916 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CHAMP1Q96JM3 812 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 FAM204AQ9H8W3 233 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CARS2Q9HA77 564 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 AGO4Q9HCK5 861 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SLC13A4Q9UKG4 626 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CTNND2Q9UQB3 1225 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ATP23Q9Y6H3 246 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 hCG_1642624A0A1W2PR95 340 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 GOLGA6L3A6NEY3 463 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TISP43B9A030 160 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 B9A039 149 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 NFIBO00712 420 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 HGSO14964 777 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 AP1G1O43747 822 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 IL18BPO95998 194 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TNNT1P13805 278 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 FPR1P21462 350 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 GLDCP23378 1020 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ZEB1P37275 1124 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 KPNA1P52294 538 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 HK2P52789 917 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 EIF5P55010 431 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ROM1Q03395 351 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 LRP8Q14114 963 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TWIST1Q15672 202 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CLEC16AQ2KHT3 1053 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 MUM1Q2TAK8 710 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TBRG1Q3YBR2 411 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 PRSS36Q5K4E3 855 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SFRP4Q6FHJ7 346 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 LIN54Q6MZP7 749 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 MZT2AQ6P582 158 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CCDC62Q6P9F0 684 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 LIPIQ6XZB0 460 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 CATSPERGQ6ZRH7 1159 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 TTLL7Q6ZT98 887 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 APBB1IPQ7Z5R6 666 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 B3GNT8Q7Z7M8 397 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ADGRE4PQ86SQ3 457 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ZBTB46Q86UZ6 589 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ZGPATQ8N5A5 531 aaKnown RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 LILRA3Q8N6C8 439 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 ABCF1Q8NE71 845 aaKnown RBP eCLIP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 IL17RDQ8NFM7 739 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 OR10H5Q8NGA6 315 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 BCL7CQ8WUZ0 217 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 MYL10Q9BUA6 226 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 OSBPL1AQ9BXW6 950 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 FAM83DQ9H4H8 585 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 BCO1Q9HAY6 547 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 SLC39A2Q9NP94 309 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 NMRK2Q9NPI5 230 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 NECTIN3Q9NQS3 549 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 STK32BQ9NY57 414 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 VSX1Q9NZR4 365 aaPredicted RBP1.33□□□□□ -2.2
HIF1A-204ENST00000539097 RCAN3Q9UKA8 241 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 MRFAP1Q9Y605 127 aa1.33□□□□□ -2.2
HIF1A-204ENST00000539097 FAM227AF5H4B4 570 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NCK2O43639 380 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DYRK3O43781 588 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NBNO60934 754 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 PRLP01236 227 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 RAC2P15153 192 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 XPAP23025 273 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 POU6F2P78424 691 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ECT2LQ008S8 904 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 GALNT1Q10472 559 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 SART3Q15020 963 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 EIF4HQ15056 248 aaKnown RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 ATP2B3Q16720 1220 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CR1LQ2VPA4 569 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 FAM83BQ5T0W9 1011 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 TLDC1Q6P9B6 456 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CEP128Q6ZU80 1094 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CABP7Q86V35 215 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 CXorf67Q86X51 503 aaPredicted RBP1.32□□□□□ -2.2
HIF1A-204ENST00000539097 NME8Q8N427 588 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 DCBLD1Q8N8Z6 715 aa1.32□□□□□ -2.2
HIF1A-204ENST00000539097 IL17REQ8NFR9 667 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms