RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 ENDOVQ8N8Q3 282 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 FBXO41Q8TF61 875 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 CTNNBL1Q8WYA6 563 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 NT5C3AQ9H0P0 336 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 GRHL1Q9NZI5 618 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 CTTNBP2NLQ9P2B4 639 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 SEC63Q9UGP8 760 aaKnown RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ARMCX3Q9UH62 379 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 GGT7Q9UJ14 662 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 ASB3Q9Y575 518 aa9.69□□□□□ -0.86
SNHG1-209ENST00000538654 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
SNHG1-209ENST00000538654 MIF4GDA9UHW6 222 aaKnown RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 GNPATO15228 680 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 CYTH3O43739 400 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 EYA4O95677 639 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 SMARCA1P28370 1054 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 RAD23BP54727 409 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 GALCP54803 685 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 WASHC2DQ5SRD0 308 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 ARHGEF18Q6ZSZ5 1173 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 ZNF713Q8N859 430 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 DRAXINQ8NBI3 349 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 GLIS3Q8NEA6 775 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 VPS37AQ8NEZ2 397 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 PRR7Q8TB68 274 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 U2AF1L4Q8WU68 220 aaKnown RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 GLG1Q92896 1179 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 ARHGEF2Q92974 986 aaKnown RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 BORCS6Q96GS4 357 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 MAGEB18Q96M61 343 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 PNMA3Q9UL41 463 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 SCAMP3O14828 347 aaKnown RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 GSTA2P09210 222 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 XRCC5P13010 732 aaKnown RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 IL2RBP14784 551 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 PON1P27169 355 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 PTGIRP43119 386 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 SLCO1A2P46721 670 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 PEX5P50542 639 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 JAM2P57087 298 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 PPATQ06203 517 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 DYNC1I2Q13409 638 aaKnown RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 CHADLQ6NUI6 762 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 UBL4BQ8N7F7 174 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 CNBD1Q8NA66 436 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 SLC35G2Q8TBE7 412 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 DTNBP1Q96EV8 351 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 BICD1Q96G01 975 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 TRAPPC9Q96Q05 1148 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 MXD3Q9BW11 206 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 KCTD10Q9H3F6 313 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 AVENQ9NQS1 362 aaPredicted RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 EMILIN3Q9NT22 766 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 MRGBPQ9NV56 204 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 RGL1Q9NZL6 768 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 DBR1Q9UK59 544 aaKnown RBP9.68□□□□□ -0.86
SNHG1-209ENST00000538654 ROBO3Q96MS0 1386 aa9.68□□□□□ -0.86
SNHG1-209ENST00000538654 KLRF2D3W0D1 207 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 DDX3XO00571 662 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNHG1-209ENST00000538654 ACTN1P12814 892 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 SLC9A1P19634 815 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 STX2P32856 288 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 STAT1P42224 750 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 RPL21P46778 160 aaKnown RBP9.67□□□□□ -0.86
SNHG1-209ENST00000538654 STRN3Q13033 797 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 MTFR1Q15390 333 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 DPY19L2P1Q6NXN4 242 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 IRGCQ6NXR0 463 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 PPP1R21Q6ZMI0 780 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 NBPF5PQ86XG9 351 aaPredicted RBP9.67□□□□□ -0.86
SNHG1-209ENST00000538654 MGARPQ8TDB4 240 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 TGS1Q96RS0 853 aaKnown RBP9.67□□□□□ -0.86
SNHG1-209ENST00000538654 IL17RBQ9NRM6 502 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.67□□□□□ -0.86
SNHG1-209ENST00000538654 NKIRAS1Q9NYS0 192 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 NR2E1Q9Y466 385 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 PASKQ96RG2 1323 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 SHANK3Q9BYB0 1731 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 GTPBP10A4D1E9 387 aaKnown RBP9.67□□□□□ -0.86
SNHG1-209ENST00000538654 TTLL1O95922 423 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 TPBGLP0DKB5 382 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 FGFR4P22455 802 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 NR2F2P24468 414 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 SSTR3P32745 418 aaPredicted RBP9.67□□□□□ -0.86
SNHG1-209ENST00000538654 LRRC14Q15048 493 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 Q3C1V9 767 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 SPDYAQ5MJ70 313 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 DCAF12L1Q5VU92 463 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 VSIG1Q86XK7 387 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 NELFCDQ8IXH7 590 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 ASAP3Q8TDY4 903 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 DNAJC9Q8WXX5 260 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 ART4Q93070 314 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 NUDCD1Q96RS6 583 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 TRIM4Q9C037 500 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 KCNK9Q9NPC2 374 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 WDR35Q9P2L0 1181 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 EVLQ9UI08 416 aaPredicted RBP9.67□□□□□ -0.86
SNHG1-209ENST00000538654 PPP1R9AQ9ULJ8 1098 aa9.67□□□□□ -0.86
SNHG1-209ENST00000538654 HNRNPCL1O60812 293 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms