RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 TAF2Q6P1X5 1199 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 NOTUMQ6P988 496 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 SLC39A5Q6ZMH5 540 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.85□□□□□ -1.151e-6■■■■■ 51
MSH6-209ENST00000538136 C11orf57Q6ZUT1 292 aaPredicted RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 RPUSD2Q8IZ73 545 aaKnown RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 RIN2Q8WYP3 895 aaPredicted RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 EIF2AQ9BY44 585 aaKnown RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 MAN1B1Q9UKM7 699 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 FAN1Q9Y2M0 1017 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 NBASA2RRP1 2371 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 LAD1O00515 517 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 NKRFO15226 690 aaKnown RBP eCLIP7.85□□□□□ -1.15
MSH6-209ENST00000538136 ITGB3P05106 788 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 SELPP16109 830 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 GLRA2P23416 452 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 KLRC2P26717 231 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 BRCC3P46736 316 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 KRT17Q04695 432 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 ABHD15Q6UXT9 468 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 MTMR12Q9C0I1 747 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 MINDY3Q9H8M7 445 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 PCDHB4Q9Y5E5 795 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 LAMB4A4D0S4 1761 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 WDR87Q6ZQQ6 2873 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 A8MXQ7 604 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 CAPN9O14815 690 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 ALDH2P05091 517 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 CA3P07451 260 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 OR4Q2P0C623 313 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 RGS7P49802 495 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 MXI1P50539 228 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 POLR2FP61218 127 aaKnown RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 MRPS6P82932 125 aaKnown RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 GSE1Q14687 1217 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 SLC5A5Q92911 643 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 PNMA5Q96PV4 448 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 SMPD4Q9NXE4 827 aa7.85□□□□□ -1.15
MSH6-209ENST00000538136 CXXC1Q9P0U4 656 aaPredicted RBP7.85□□□□□ -1.15
MSH6-209ENST00000538136 IGLV3-22A0A075B6J6 115 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 HUS1O60921 280 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 PPP6R2O75170 966 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 MOCS2O96007 188 aaPredicted RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 PTMSP20962 102 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 MSNP26038 577 aaKnown RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 POLR2BP30876 1174 aaKnown RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 NDUFV1P49821 464 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 CDH8P55286 799 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 APBA1Q02410 837 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 CAPSQ13938 189 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 ZNF484Q5JVG2 852 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 ZBTB41Q5SVQ8 909 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 TMC5Q6UXY8 1006 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 KIAA1328Q86T90 577 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 EXOC8Q8IYI6 725 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 ABRAQ8N0Z2 381 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 XXYLT1Q8NBI6 393 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 NEK11Q8NG66 645 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 FGFBP2Q9BYJ0 223 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 RNF216Q9NWF9 866 aaPredicted RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 PCDHB2Q9Y5E7 798 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 TRPV2Q9Y5S1 764 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 ACTN4O43707 911 aaKnown RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 GRAP2O75791 330 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 NR3C1P04150 777 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 STAG3L1P0CL83 205 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 DEKP35659 375 aaKnown RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 PRMT2P55345 433 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 MORC3Q14149 939 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 SNX17Q15036 470 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 C9orf50Q5SZB4 431 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 XRRA1Q6P2D8 792 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 DNAAF5Q86Y56 855 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 BSNDQ8WZ55 320 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 HHIPL1Q96JK4 782 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 RPGRIP1Q96KN7 1286 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 CNOT6LQ96LI5 555 aaKnown RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 LSM14BQ9BX40 385 aaKnown RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 PLEKHA4Q9H4M7 779 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 UBE2TQ9NPD8 197 aaPredicted RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 STK17AQ9UEE5 414 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 SLC27A5Q9Y2P5 690 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 SCN7AQ01118 1682 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 CTAGE5O15320 804 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 IRF1P10914 325 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 CKBP12277 381 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 ARF4P18085 180 aaPredicted RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 MAGEA10P43363 369 aaPredicted RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 RAP1GAPP47736 663 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 NPY5RQ15761 445 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 CDO1Q16878 200 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 FIBCD1Q8N539 461 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 ETNPPLQ8TBG4 499 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 CLSTN2Q9H4D0 955 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 C1orf112Q9NSG2 853 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 DIS3Q9Y2L1 958 aaKnown RBP7.84□□□□□ -1.15
MSH6-209ENST00000538136 MYH3P11055 1940 aa7.84□□□□□ -1.15
MSH6-209ENST00000538136 BICDL2A1A5D9 508 aa7.83□□□□□ -1.16
MSH6-209ENST00000538136 TBX3O15119 743 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms