RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 SLC35G1Q2M3R5 365 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 TSHZ3Q63HK5 1081 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 PKN3Q6P5Z2 889 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 RNF168Q8IYW5 571 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-217ENST00000537162 GIMAP8Q8ND71 665 aaPredicted RBP10.87□□□□□ -0.67
CPSF7-217ENST00000537162 PNMA1Q8ND90 353 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 MTMR8Q96EF0 704 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 CACNA1EQ15878 2313 aa10.87□□□□□ -0.67
CPSF7-217ENST00000537162 PTPN13Q12923 2485 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.86□□□□□ -0.67
CPSF7-217ENST00000537162 DCLK1O15075 740 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 MAP3K13O43283 966 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 CSDE1O75534 798 aaKnown RBP10.86□□□□□ -0.67
CPSF7-217ENST00000537162 RLBP1P12271 317 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 GLUD2P49448 558 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 PCNX4Q63HM2 1172 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 TMEFF1Q8IYR6 380 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 SAMD3Q8N6K7 520 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 AZI2Q9H6S1 392 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 BRD9Q9H8M2 597 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 ZNF334Q9HCZ1 680 aaPredicted RBP10.86□□□□□ -0.67
CPSF7-217ENST00000537162 POLR3BQ9NW08 1133 aaPredicted RBP10.86□□□□□ -0.67
CPSF7-217ENST00000537162 ACACAQ13085 2346 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 SPTA1P02549 2419 aa10.86□□□□□ -0.67
CPSF7-217ENST00000537162 TRIM6-TRIM34B2RNG4 842 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 MEFVO15553 781 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-217ENST00000537162 C22orf31O95567 290 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 ZFYP08048 801 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-217ENST00000537162 PHKA2P46019 1235 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 SOX9P48436 509 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 STAT5BP51692 787 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 CLCN3P51790 818 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 NLRP11P59045 1033 aaKnown RBP10.85□□□□□ -0.67
CPSF7-217ENST00000537162 IRX4P78413 519 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 DSG1Q02413 1049 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-217ENST00000537162 SLC5A9Q2M3M2 681 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 ASPRV1Q53RT3 343 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 PLPPR4Q7Z2D5 763 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 PIP4P1Q86T03 277 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 NLRX1Q86UT6 975 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 MAP4K3Q8IVH8 894 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 DNMT3BQ9UBC3 853 aaKnown RBP10.85□□□□□ -0.67
CPSF7-217ENST00000537162 POLIQ9UNA4 740 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 FAN1Q9Y2M0 1017 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 PRG3Q9Y2Y8 225 aaPredicted RBP10.85□□□□□ -0.67
CPSF7-217ENST00000537162 PTPRBP23467 1997 aa10.85□□□□□ -0.67
CPSF7-217ENST00000537162 NCANO14594 1321 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 ZBTB5O15062 677 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 SMARCA5O60264 1052 aaPredicted RBP10.84□□□□□ -0.67
CPSF7-217ENST00000537162 EIF4BP23588 611 aaKnown RBP10.84□□□□□ -0.67
CPSF7-217ENST00000537162 VASPP50552 380 aaPredicted RBP10.84□□□□□ -0.67
CPSF7-217ENST00000537162 KCNC4Q03721 635 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 PCSK4Q6UW60 755 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 GLB1LQ6UWU2 654 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 CCNI2Q6ZMN8 369 aaPredicted RBP10.84□□□□□ -0.67
CPSF7-217ENST00000537162 ITPRIPQ8IWB1 547 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 SIRT2Q8IXJ6 389 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 ELSPBP1Q96BH3 223 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 GPRASP2Q96D09 838 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 MBOAT7Q96N66 472 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 SLC32A1Q9H598 525 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 CHST12Q9NRB3 414 aa10.84□□□□□ -0.67
CPSF7-217ENST00000537162 COL5A1P20908 1838 aaPredicted RBP10.84□□□□□ -0.67
CPSF7-217ENST00000537162 ATMQ13315 3056 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 ALDH2P05091 517 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 PARP1P09874 1014 aaKnown RBP10.83□□□□□ -0.68
CPSF7-217ENST00000537162 ATP4AP20648 1035 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 GDI1P31150 447 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 ACTR2P61160 394 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 ZMYM1Q5SVZ6 1142 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 TXNDC11Q6PKC3 985 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 USP17L6PQ6QN14 398 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 HOMER1Q86YM7 354 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 METTL13Q8N6R0 699 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 PIP4K2CQ8TBX8 421 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 JPH1Q9HDC5 661 aaPredicted RBP10.83□□□□□ -0.68
CPSF7-217ENST00000537162 CHST7Q9NS84 486 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 STK39Q9UEW8 545 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 FBXW11Q9UKB1 542 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 SSX2IPQ9Y2D8 614 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 VWA8A3KMH1 1905 aa10.83□□□□□ -0.68
CPSF7-217ENST00000537162 URB1O60287 2271 aaKnown RBP10.83□□□□□ -0.68
CPSF7-217ENST00000537162 ADAMTS9Q9P2N4 1935 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 A0A087WV48 116 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 CARNS1A5YM72 827 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 H0Y626 953 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 KHNYNO15037 678 aaKnown RBP10.82□□□□□ -0.68
CPSF7-217ENST00000537162 HBP1O60381 514 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 TRIM16O95361 564 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 CEBPBP17676 345 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 HAND2P61296 217 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 LRRC32Q14392 662 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 PRSS55Q6UWB4 352 aaPredicted RBP10.82□□□□□ -0.68
CPSF7-217ENST00000537162 VITQ6UXI7 678 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 AGMOQ6ZNB7 445 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 TBC1D10CQ8IV04 446 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 PNPLA1Q8N8W4 532 aa10.82□□□□□ -0.68
CPSF7-217ENST00000537162 TNPO1Q92973 898 aaKnown RBP10.82□□□□□ -0.68
CPSF7-217ENST00000537162 PIGSQ96S52 555 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms