RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 GADL1Q6ZQY3 521 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 PEX26Q7Z412 305 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 EIF1ADQ8N9N8 165 aaKnown RBP14.68□□□□□ -0.06
SMG6-203ENST00000536871 MORC4Q8TE76 937 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 DHX38Q92620 1227 aaKnown RBP14.68□□□□□ -0.06
SMG6-203ENST00000536871 BICD1Q96G01 975 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 L3MBTL3Q96JM7 780 aaPredicted RBP14.68□□□□□ -0.06
SMG6-203ENST00000536871 WDR90Q96KV7 1748 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 NT5C1BQ96P26 610 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 TMEM134Q9H6X4 195 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 MED4Q9NPJ6 270 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 XPNPEP1Q9NQW7 623 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 RNF181Q9P0P0 153 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 STYXL1Q9Y6J8 313 aa14.68□□□□□ -0.06
SMG6-203ENST00000536871 TMEM150BA6NC51 233 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 TULP2O00295 520 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 SASH3O75995 380 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 LIG4P49917 911 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 CYP24A1Q07973 514 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 CASP8Q14790 479 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 C8orf74Q6P047 294 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 METTL7BQ6UX53 244 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 CCNI2Q6ZMN8 369 aaPredicted RBP14.67□□□□□ -0.06
SMG6-203ENST00000536871 CYFIP1Q7L576 1253 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 FAM71AQ8IYT1 594 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 LNX1Q8TBB1 728 aaPredicted RBP14.67□□□□□ -0.06
SMG6-203ENST00000536871 SEPT1Q8WYJ6 367 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 JPH2Q9BR39 696 aaPredicted RBP14.67□□□□□ -0.06
SMG6-203ENST00000536871 STIM2Q9P246 746 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 AMFRQ9UKV5 643 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 FZD1Q9UP38 647 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 ZC3H4Q9UPT8 1303 aaKnown RBP14.67□□□□□ -0.06
SMG6-203ENST00000536871 PAPPA2Q9BXP8 1791 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 ANKRD63C9JTQ0 380 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 CCDC188H7C350 402 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 FOXN3O00409 490 aaPredicted RBP14.67□□□□□ -0.06
SMG6-203ENST00000536871 FTCDO95954 541 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 DLG4P78352 724 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 CLDN10P78369 228 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 GCNT1Q02742 428 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 C2orf54Q08AI8 447 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 PRKG1Q13976 671 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 TERF2Q15554 542 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 ARHGAP44Q17R89 818 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 MTERF2Q49AM1 385 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 EMBQ6PCB8 327 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 ARMC9Q7Z3E5 817 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 NCAPG2Q86XI2 1143 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 CBWD2Q8IUF1 395 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 GLYCTKQ8IVS8 523 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 IFT20Q8IY31 132 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 DEPTORQ8TB45 409 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 SHC3Q92529 594 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 UPF1Q92900 1129 aaKnown RBP eCLIP14.67□□□□□ -0.067e-6■■■■□ 22.8
SMG6-203ENST00000536871 NAP1L3Q99457 506 aaPredicted RBP14.67□□□□□ -0.06
SMG6-203ENST00000536871 MROH8Q9H579 483 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 RAB20Q9NX57 234 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 BTBD7Q9P203 1132 aa14.67□□□□□ -0.06
SMG6-203ENST00000536871 NCK2O43639 380 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 RTN2O75298 545 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 FARP2O94887 1054 aaPredicted RBP14.66□□□□□ -0.06
SMG6-203ENST00000536871 ADRB2P07550 413 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 UBA1P22314 1058 aaKnown RBP14.66□□□□□ -0.06
SMG6-203ENST00000536871 ARL2P36404 184 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 SLC26A2P50443 739 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 EFNA5P52803 228 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 NNTQ13423 1086 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 PPP1R2P3Q6NXS1 205 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 SEPT14Q6ZU15 432 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 GPIHBP1Q8IV16 184 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 SHCBP1Q8NEM2 672 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 TCP11Q8WWU5 503 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 BSNDQ8WZ55 320 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 SH2D3AQ9BRG2 576 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 ASCC2Q9H1I8 757 aaPredicted RBP14.66□□□□□ -0.06
SMG6-203ENST00000536871 ISCUQ9H1K1 167 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 AZI2Q9H6S1 392 aa14.66□□□□□ -0.06
SMG6-203ENST00000536871 TTC7AQ9ULT0 858 aaPredicted RBP14.66□□□□□ -0.06
SMG6-203ENST00000536871 LRRIQ3A6PVS8 624 aaPredicted RBP14.65□□□□□ -0.06
SMG6-203ENST00000536871 STAT5BP51692 787 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 AP3M2P53677 418 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 EPHB4P54760 987 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 BPIFB4P59827 614 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 IRX5P78411 483 aaPredicted RBP14.65□□□□□ -0.06
SMG6-203ENST00000536871 PSMD6Q15008 389 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 USP38Q8NB14 1042 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 MIF4GDA9UHW6 222 aaKnown RBP14.65□□□□□ -0.06
SMG6-203ENST00000536871 TISP43B9A030 160 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 ADM5C9JUS6 153 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 K7ERI5 159 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 PGRMC1O00264 195 aaKnown RBP14.65□□□□□ -0.06
SMG6-203ENST00000536871 KCNK3O14649 394 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 CXCR5P32302 372 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 SP2Q02086 613 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 CNTN2Q02246 1040 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 SP4Q02446 784 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 KCTD2Q14681 263 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 TARBP2Q15633 366 aaKnown RBP14.65□□□□□ -0.06
SMG6-203ENST00000536871 C11orf63Q6NUN7 778 aa14.65□□□□□ -0.06
SMG6-203ENST00000536871 DAAM2Q86T65 1068 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms