RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 TOB2Q14106 344 aaPredicted RBP8.02□□□□□ -1.13
YBX3-206ENST00000536823 ECM1Q16610 540 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 PFKFB3Q16875 520 aaPredicted RBP8.02□□□□□ -1.13
YBX3-206ENST00000536823 TRIM71Q2Q1W2 868 aaKnown RBP8.02□□□□□ -1.13
YBX3-206ENST00000536823 C16orf46Q6P387 395 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 RUFY3Q7L099 469 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 TP53INP2Q8IXH6 220 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 RPUSD2Q8IZ73 545 aaKnown RBP8.02□□□□□ -1.13
YBX3-206ENST00000536823 GIMAP8Q8ND71 665 aaPredicted RBP8.02□□□□□ -1.13
YBX3-206ENST00000536823 AFAP1L1Q8TED9 768 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 FBXL18Q96ME1 805 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 GUCD1Q96NT3 240 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 GPR20Q99678 358 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 UPF3BQ9BZI7 483 aaKnown RBP8.02□□□□□ -1.13
YBX3-206ENST00000536823 JADE2Q9NQC1 790 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 STXBP5LQ9Y2K9 1186 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 CYP46A1Q9Y6A2 500 aa8.02□□□□□ -1.13
YBX3-206ENST00000536823 SMCO2A6NFE2 343 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 H3BRB1 525 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 PRPF3O43395 683 aaKnown RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 IQCF3P0C7M6 154 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 SMIM10L2AP0DMW4 78 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 SMIM10L2BP0DMW5 78 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 PDIA3P30101 505 aaKnown RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 ARHGAP4P98171 946 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 AKAP17AQ02040 695 aaKnown RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 SP4Q02446 784 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 NTRK3Q16288 839 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 PKN1Q16512 942 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 DUOXA2Q1HG44 320 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 TXNDC11Q6PKC3 985 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 SPOCD1Q6ZMY3 1216 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 OTOP2Q7RTS6 562 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 DEFB128Q7Z7B8 93 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 CCDC12Q8WUD4 166 aaPredicted RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 PHKBQ93100 1093 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 PGBD1Q96JS3 809 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 MFSD14AQ96MC6 490 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 MXRA8Q9BRK3 442 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 RNF26Q9BY78 433 aaPredicted RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 ZMYND12Q9H0C1 365 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 TTYH1Q9H313 450 aaPredicted RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 TUT1Q9H6E5 874 aaKnown RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 NCOA5Q9HCD5 579 aaKnown RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 ZNF215Q9UL58 517 aaPredicted RBP8.01□□□□□ -1.13
YBX3-206ENST00000536823 TELO2Q9Y4R8 837 aa8.01□□□□□ -1.13
YBX3-206ENST00000536823 GBF1Q92538 1859 aa8□□□□□ -1.13
YBX3-206ENST00000536823 BRWD1Q9NSI6 2320 aa8□□□□□ -1.13
YBX3-206ENST00000536823 C17orf102A2RUQ5 167 aa8□□□□□ -1.13
YBX3-206ENST00000536823 GRXCR1A8MXD5 290 aa8□□□□□ -1.13
YBX3-206ENST00000536823 MAFGO15525 162 aa8□□□□□ -1.13
YBX3-206ENST00000536823 MMP20O60882 483 aa8□□□□□ -1.13
YBX3-206ENST00000536823 ATP9AO75110 1047 aa8□□□□□ -1.13
YBX3-206ENST00000536823 MICAL2O94851 1124 aa8□□□□□ -1.13
YBX3-206ENST00000536823 PARNO95453 639 aaKnown RBP8□□□□□ -1.13
YBX3-206ENST00000536823 ABL1P00519 1130 aa8□□□□□ -1.13
YBX3-206ENST00000536823 CKBP12277 381 aa8□□□□□ -1.13
YBX3-206ENST00000536823 ACTN1P12814 892 aa8□□□□□ -1.13
YBX3-206ENST00000536823 ANAPC15P60006 121 aa8□□□□□ -1.13
YBX3-206ENST00000536823 CCT2P78371 535 aaKnown RBP8□□□□□ -1.13
YBX3-206ENST00000536823 ZNF200P98182 395 aaPredicted RBP8□□□□□ -1.13
YBX3-206ENST00000536823 NAA30Q147X3 362 aaPredicted RBP8□□□□□ -1.13
YBX3-206ENST00000536823 RAB30Q15771 203 aa8□□□□□ -1.13
YBX3-206ENST00000536823 MSMPQ1L6U9 139 aa8□□□□□ -1.13
YBX3-206ENST00000536823 CEP55Q53EZ4 464 aa8□□□□□ -1.13
YBX3-206ENST00000536823 COX20Q5RI15 118 aa8□□□□□ -1.13
YBX3-206ENST00000536823 UTP14CQ5TAP6 766 aaKnown RBP8□□□□□ -1.13
YBX3-206ENST00000536823 MCTP2Q6DN12 878 aa8□□□□□ -1.13
YBX3-206ENST00000536823 LRRC8DQ7L1W4 858 aa8□□□□□ -1.13
YBX3-206ENST00000536823 NIPA1Q7RTP0 329 aa8□□□□□ -1.13
YBX3-206ENST00000536823 SERINC5Q86VE9 423 aa8□□□□□ -1.13
YBX3-206ENST00000536823 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
YBX3-206ENST00000536823 CCDC148Q8NFR7 591 aa8□□□□□ -1.13
YBX3-206ENST00000536823 GIMAP7Q8NHV1 300 aa8□□□□□ -1.13
YBX3-206ENST00000536823 SEPT1Q8WYJ6 367 aa8□□□□□ -1.13
YBX3-206ENST00000536823 WNT8BQ93098 351 aa8□□□□□ -1.13
YBX3-206ENST00000536823 TIFAQ96CG3 184 aa8□□□□□ -1.13
YBX3-206ENST00000536823 ZNF274Q96GC6 653 aaPredicted RBP8□□□□□ -1.13
YBX3-206ENST00000536823 FAM161BQ96MY7 647 aa8□□□□□ -1.13
YBX3-206ENST00000536823 SLC26A6Q9BXS9 759 aa8□□□□□ -1.13
YBX3-206ENST00000536823 PBX4Q9BYU1 374 aa8□□□□□ -1.13
YBX3-206ENST00000536823 SAP130Q9H0E3 1048 aa8□□□□□ -1.13
YBX3-206ENST00000536823 KCNH7Q9NS40 1196 aa8□□□□□ -1.13
YBX3-206ENST00000536823 PDRG1Q9NUG6 133 aa8□□□□□ -1.13
YBX3-206ENST00000536823 TMEM260Q9NX78 707 aa8□□□□□ -1.13
YBX3-206ENST00000536823 SLC4A7Q9Y6M7 1214 aa8□□□□□ -1.13
YBX3-206ENST00000536823 NFASCO94856 1347 aa8□□□□□ -1.13
YBX3-206ENST00000536823 EMSYQ7Z589 1322 aa8□□□□□ -1.13
YBX3-206ENST00000536823 GSTTP1A0A1W2PQM5 241 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 MEIS1O00470 390 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 ADAMTS3O15072 1205 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 CAND2O75155 1236 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 XYLBO75191 536 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 BAIAP3O94812 1187 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 CXCL10P02778 98 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 GNAT1P11488 350 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 ATP2A2P16615 1042 aaKnown RBP7.99□□□□□ -1.13
YBX3-206ENST00000536823 GNA11P29992 359 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 SOX18P35713 384 aa7.99□□□□□ -1.13
YBX3-206ENST00000536823 TCF7P36402 384 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms