RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 DCLRE1AQ6PJP8 1040 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 CYP26C1Q6V0L0 522 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 SRGAP1Q7Z6B7 1085 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 MRPL10Q7Z7H8 261 aaKnown RBP8.98□□□□□ -0.97
CHFR-211ENST00000535897 EXOC8Q8IYI6 725 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 RNF149Q8NC42 400 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 CNNM3Q8NE01 707 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 NXPE3Q969Y0 559 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 B3GALT6Q96L58 329 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 CEP89Q96ST8 783 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 GAD1Q99259 594 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 TRIM6Q9C030 488 aaPredicted RBP8.98□□□□□ -0.97
CHFR-211ENST00000535897 MINDY3Q9H8M7 445 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 NCOA5Q9HCD5 579 aaKnown RBP8.98□□□□□ -0.97
CHFR-211ENST00000535897 SH3GLB2Q9NR46 395 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 MARCH5Q9NX47 278 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.98□□□□□ -0.97
CHFR-211ENST00000535897 EPS15L1Q9UBC2 864 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 DDX25Q9UHL0 483 aaKnown RBP8.98□□□□□ -0.97
CHFR-211ENST00000535897 PCDHA4Q9UN74 947 aa8.98□□□□□ -0.97
CHFR-211ENST00000535897 TDRD15B5MCY1 1934 aaKnown RBP8.97□□□□□ -0.97
CHFR-211ENST00000535897 MED19A0JLT2 244 aaPredicted RBP8.97□□□□□ -0.97
CHFR-211ENST00000535897 F8W810 466 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 INO80B-WBP1J3KQ70 363 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 CPLX1O14810 134 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 EDIL3O43854 480 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 GAS2O43903 313 aaKnown RBP8.97□□□□□ -0.97
CHFR-211ENST00000535897 CDC45O75419 566 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 SP9P0CG40 484 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 LAMP2P13473 410 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 IFNAR1P17181 557 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 NCLP19338 710 aaKnown RBP8.97□□□□□ -0.97
CHFR-211ENST00000535897 SCNN1GP51170 649 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 SSRP1Q08945 709 aaKnown RBP8.97□□□□□ -0.97
CHFR-211ENST00000535897 EMC2Q15006 297 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 KIAA0319Q5VV43 1072 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 NOTUMQ6P988 496 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 C1orf210Q8IVY1 113 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 COLGALT2Q8IYK4 626 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 HACE1Q8IYU2 909 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 BLIDQ8IZY5 108 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
CHFR-211ENST00000535897 SMG8Q8ND04 991 aaKnown RBP8.97□□□□□ -0.97
CHFR-211ENST00000535897 ETNPPLQ8TBG4 499 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 TCP11Q8WWU5 503 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 RUBCNQ92622 972 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 ZFP42Q96MM3 310 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 COLEC11Q9BWP8 271 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 FOXQ1Q9C009 403 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 PLEKHA4Q9H4M7 779 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 HES2Q9Y543 173 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 IPPQ9Y573 584 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 NUMBLQ9Y6R0 609 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 NID2Q14112 1375 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 DNAH14Q0VDD8 3507 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 OTOGLQ3ZCN5 2332 aa8.97□□□□□ -0.97
CHFR-211ENST00000535897 MIA3Q5JRA6 1907 aa8.96□□□□□ -0.97
CHFR-211ENST00000535897 CYP3A7-CYP3A51PA0A087WV96 503 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 EML1O00423 815 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 TGM5O43548 720 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 TSPAN1O60635 241 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 KINO60870 393 aaKnown RBP8.96□□□□□ -0.98
CHFR-211ENST00000535897 RPL17P18621 184 aaKnown RBP8.96□□□□□ -0.98
CHFR-211ENST00000535897 RPS6KB1P23443 525 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 FSHRP23945 695 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 CYP3A7P24462 503 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 HOXA11P31270 313 aaPredicted RBP8.96□□□□□ -0.98
CHFR-211ENST00000535897 YWHABP31946 246 aaKnown RBP8.96□□□□□ -0.98
CHFR-211ENST00000535897 DSG1Q02413 1049 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 CREMQ03060 361 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 HTR4Q13639 388 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 TFDP1Q14186 410 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 PUM1Q14671 1186 aaKnown RBP eCLIP8.96□□□□□ -0.98
CHFR-211ENST00000535897 NTRK3Q16288 839 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 INF2Q27J81 1249 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 USP41Q3LFD5 358 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 XKR9Q5GH70 373 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 LIN9Q5TKA1 542 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 PHLDB3Q6NSJ2 640 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 B3GNT9Q6UX72 402 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 OTUD6AQ7L8S5 288 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 SKAP1Q86WV1 359 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 DCLK2Q8N568 766 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 PJA1Q8NG27 643 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 HDAC7Q8WUI4 952 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 RABGGTAQ92696 567 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 ZNF707Q96C28 371 aaPredicted RBP8.96□□□□□ -0.98
CHFR-211ENST00000535897 SHDQ96IW2 340 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 CPB2Q96IY4 423 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 CCDC43Q96MW1 224 aaKnown RBP8.96□□□□□ -0.98
CHFR-211ENST00000535897 MTRQ99707 1265 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 LXNQ9BS40 222 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 EIF2AQ9BY44 585 aaKnown RBP8.96□□□□□ -0.98
CHFR-211ENST00000535897 BCO2Q9BYV7 579 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 RHOBTB2Q9BYZ6 727 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 PRKD2Q9BZL6 878 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 NT5C3AQ9H0P0 336 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 RNF39Q9H2S5 420 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 RXFP1Q9HBX9 757 aa8.96□□□□□ -0.98
CHFR-211ENST00000535897 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms