RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 FOSL2P15408 326 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 CMA1P23946 247 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 CTNNB1P35222 781 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 NCKAP1LP55160 1127 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 EEF1DP3Q658K8 133 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 FIZ1Q96SL8 496 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 RNF39Q9H2S5 420 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 CWH43Q9H720 699 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 TYW1Q9NV66 732 aaKnown RBP25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 KBTBD4Q9NVX7 518 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 RWDD3Q9Y3V2 267 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 HES2Q9Y543 173 aa25.01■■□□□ 1.59
SFSWAP-204ENST00000535399 C5orf67F2Z3F1 127 aa25■■□□□ 1.59
SFSWAP-204ENST00000535399 ATF7IP2Q5U623 682 aa25■■□□□ 1.59
SFSWAP-204ENST00000535399 GDPD5Q8WTR4 605 aa25■■□□□ 1.59
SFSWAP-204ENST00000535399 GAS2L1Q99501 681 aaPredicted RBP25■■□□□ 1.59
SFSWAP-204ENST00000535399 TRIM6Q9C030 488 aaPredicted RBP25■■□□□ 1.59
SFSWAP-204ENST00000535399 TNMDQ9H2S6 317 aa25■■□□□ 1.59
SFSWAP-204ENST00000535399 NXF3Q9H4D5 531 aaKnown RBP25■■□□□ 1.59
SFSWAP-204ENST00000535399 ZHX3Q9H4I2 956 aa25■■□□□ 1.59
SFSWAP-204ENST00000535399 KCNH3Q9ULD8 1083 aa25■■□□□ 1.59
SFSWAP-204ENST00000535399 RB1P06400 928 aa24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 ITGA4P13612 1032 aa24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 TMEM132AQ24JP5 1023 aa24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 GLB1LQ6UWU2 654 aa24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 LRRC43Q8N309 656 aa24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 RSPH1Q8WYR4 309 aa24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 STAMQ92783 540 aa24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 ACO2Q99798 780 aaKnown RBP24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 MRPL4Q9BYD3 311 aaKnown RBP24.99■■□□□ 1.59
SFSWAP-204ENST00000535399 H0YCG3 227 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 TRAK2O60296 914 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 PFKFB1P16118 471 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 NOMO2Q5JPE7 1267 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 HAUS6Q7Z4H7 955 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 TARS2Q9BW92 718 aaKnown RBP24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 PLVAPQ9BX97 442 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 RSAD1Q9HA92 442 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 PTPRHQ9HD43 1115 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 HPSEQ9Y251 543 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 TNFSF13BQ9Y275 285 aa24.98■■□□□ 1.59
SFSWAP-204ENST00000535399 FAM237AA0A1B0GTK4 181 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 A0A1B0GVL5 298 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 FRMD3A2A2Y4 597 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 H3BNC9 293 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 POU3F3P20264 500 aaPredicted RBP24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 AFF1P51825 1210 aaKnown RBP24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 STRN3Q13033 797 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 SFR1Q86XK3 245 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 FAM178BQ8IXR5 827 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 PYM1Q9BRP8 204 aaKnown RBP24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 ADPGKQ9BRR6 497 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 MRPL9Q9BYD2 267 aaKnown RBP24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 MAGEF1Q9HAY2 307 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 UBN1Q9NPG3 1134 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 INPP5FQ9Y2H2 1132 aa24.97■■□□□ 1.59
SFSWAP-204ENST00000535399 A0A1W2PQ27 194 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 A0A1W2PQ64 194 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 A0A1W2PQD8 194 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 K7ENM7 598 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 INPPL1O15357 1258 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 SCP2P22307 547 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 IGFBP4P22692 258 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 NMT1P30419 496 aaKnown RBP24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 GPM6BQ13491 265 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 DCAF4L1Q3SXM0 396 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 SPOUT1Q5T280 376 aaKnown RBP24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 HACE1Q8IYU2 909 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 COLGALT1Q8NBJ5 622 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 C11orf84Q9BUA3 381 aaPredicted RBP24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 APOL6Q9BWW8 343 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 TRIM9Q9C026 710 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 SEL1LQ9UBV2 794 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 GIT1Q9Y2X7 761 aa24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 FNDC1Q4ZHG4 1894 aaPredicted RBP24.96■■□□□ 1.59
SFSWAP-204ENST00000535399 ABLIM1O14639 778 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 GAP43P17677 238 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 LAG3P18627 525 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 PROZP22891 400 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 AKAP5P24588 427 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 CNNM4Q6P4Q7 775 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 P2RX5Q93086 422 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 GAD1Q99259 594 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 LRRC27Q9C0I9 530 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 CDT1Q9H211 546 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 ST6GALNAC4Q9H4F1 302 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 TBC1D13Q9NVG8 400 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 TBX20Q9UMR3 447 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 MTCH2Q9Y6C9 303 aa24.95■■□□□ 1.58
SFSWAP-204ENST00000535399 ACTN4O43707 911 aaKnown RBP24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 SLFN14P0C7P3 912 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 IDEP14735 1019 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 GTF2BQ00403 316 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 AMPD3Q01432 767 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 ZPBP2Q6X784 338 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 KLHL23Q8NBE8 558 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 SLC17A8Q8NDX2 589 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 URGCPQ8TCY9 931 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 C7orf25Q9BPX7 421 aa24.94■■□□□ 1.58
SFSWAP-204ENST00000535399 AAASQ9NRG9 546 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms