RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 SLC7A3Q8WY07 619 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 TMEM143Q96AN5 459 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 ACSF2Q96CM8 615 aaPredicted RBP11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 NLRP4Q96MN2 994 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 ZNF558Q96NG5 402 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 SCLT1Q96NL6 688 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 XPNPEP1Q9NQW7 623 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 AGPAT5Q9NUQ2 364 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 FAM105AQ9NUU6 356 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 PCDHA12Q9UN75 941 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 DUSP12Q9UNI6 340 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 LIMCH1Q9UPQ0 1083 aa11.23□□□□□ -0.61
CLSTN3-203ENST00000534830 MEIS3P2A8K0S8 358 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 OFD1O75665 1012 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 PPM1AP35813 382 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 POLGP54098 1239 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 BCAR1P56945 870 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 CYP4A11Q02928 519 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 POU5F1BQ06416 359 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 BMS1Q14692 1282 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 EMC2Q15006 297 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 CALCRLQ16602 461 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 C8orf34Q49A92 452 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 SPECC1Q5M775 1068 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 TWF2Q6IBS0 349 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 AGMOQ6ZNB7 445 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 CATSPER4Q7RTX7 472 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 MRPL10Q7Z7H8 261 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 FERMT3Q86UX7 667 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 IFNLR1Q8IU57 520 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 ABI1Q8IZP0 508 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 TCP11Q8WWU5 503 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 PSPC1Q8WXF1 523 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 LPPQ93052 612 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 LLPHQ9BRT6 129 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 MRPL9Q9BYD2 267 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 TMEM60Q9H2L4 133 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 TTC12Q9H892 705 aaPredicted RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 ANKEF1Q9NU02 776 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 SPG21Q9NZD8 308 aa11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 PIN4Q9Y237 131 aaKnown RBP11.22□□□□□ -0.61
CLSTN3-203ENST00000534830 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 MARCH6O60337 910 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 NEMFO60524 1076 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 CXCL14O95715 111 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 CFHP08603 1231 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 SP9P0CG40 484 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 SRGAP2CP0DJJ0 459 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 SPATA31C1P0DKV0 1188 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 XRCC6P12956 609 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 SDHBP21912 280 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 RAB27AP51159 221 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 PTENP60484 403 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 PCBP1Q15365 356 aaKnown RBP eCLIP11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 XKR9Q5GH70 373 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 UBXN11Q5T124 520 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 KIAA0319Q5VV43 1072 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 TMC5Q6UXY8 1006 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 CCDC149Q6ZUS6 474 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 OTOP3Q7RTS5 596 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 TPH2Q8IWU9 490 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 RNF169Q8NCN4 708 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 CHAMP1Q96JM3 812 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 MTRQ99707 1265 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 NRDE2Q9H7Z3 1164 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 KCNK12Q9HB15 430 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 DZANK1Q9NVP4 752 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 PCDHB2Q9Y5E7 798 aa11.21□□□□□ -0.61
CLSTN3-203ENST00000534830 FANCMQ8IYD8 2048 aa11.21□□□□□ -0.62
CLSTN3-203ENST00000534830 BAHCC1Q9P281 2608 aa11.21□□□□□ -0.62
CLSTN3-203ENST00000534830 CACNA1IQ9P0X4 2223 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 CARNS1A5YM72 827 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 NT5C1B-RDH14C9J2C7 533 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 INPPL1O15357 1258 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 NARSO43776 548 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 DGAT1O75907 488 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 DCNP07585 359 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 GALTP07902 379 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 EPCAMP16422 314 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 ARL2P36404 184 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 TXKP42681 527 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 RARRES1P49788 294 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 ATXN1P54253 815 aaKnown RBP11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 TRIM29Q14134 588 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 MXD4Q14582 209 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 AMHR2Q16671 573 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 NOMO2Q5JPE7 1267 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 CABP7Q86V35 215 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 TMEM173Q86WV6 379 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 CCDC83Q8IWF9 413 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 RNF149Q8NC42 400 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 FEZF2Q8TBJ5 459 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 ZSCAN31Q96LW9 406 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 NFKBIZQ9BYH8 718 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 FOXP1Q9H334 677 aaPredicted RBP11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 TBC1D17Q9HA65 648 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 TBC1D13Q9NVG8 400 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 NCDNQ9UBB6 729 aa11.2□□□□□ -0.62
CLSTN3-203ENST00000534830 CA14Q9ULX7 337 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms