RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 PPP4R3CPQ6ZMV5 832 aa14.85□□□□□ -0.03
CAPN1-228ENST00000534373 RNF135Q8IUD6 432 aa14.85□□□□□ -0.03
CAPN1-228ENST00000534373 TMEM87AQ8NBN3 555 aa14.85□□□□□ -0.03
CAPN1-228ENST00000534373 TRIM6Q9C030 488 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-228ENST00000534373 C2orf40Q9H1Z8 148 aa14.85□□□□□ -0.03
CAPN1-228ENST00000534373 PRMT7Q9NVM4 692 aaPredicted RBP14.85□□□□□ -0.03
CAPN1-228ENST00000534373 DNAJB4Q9UDY4 337 aa14.85□□□□□ -0.03
CAPN1-228ENST00000534373 FAN1Q9Y2M0 1017 aa14.85□□□□□ -0.03
CAPN1-228ENST00000534373 HCFC2Q9Y5Z7 792 aa14.85□□□□□ -0.03
CAPN1-228ENST00000534373 ZMYM2Q9UBW7 1377 aa14.85□□□□□ -0.03
CAPN1-228ENST00000534373 A0A087WWV3 80 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
CAPN1-228ENST00000534373 CDCA2Q69YH5 1023 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-228ENST00000534373 SYCE2Q6PIF2 218 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 PADI6Q6TGC4 694 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 PPFIBP1Q86W92 1011 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 TMEM173Q86WV6 379 aaPredicted RBP14.84□□□□□ -0.03
CAPN1-228ENST00000534373 ZBTB8OSQ8IWT0 167 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 IGSF22Q8N9C0 903 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 CPB2Q96IY4 423 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 EIF2AQ9BY44 585 aaKnown RBP14.84□□□□□ -0.03
CAPN1-228ENST00000534373 GBP3Q9H0R5 595 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 FZD8Q9H461 694 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 LRWD1Q9UFC0 647 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 SSX2IPQ9Y2D8 614 aa14.84□□□□□ -0.03
CAPN1-228ENST00000534373 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-228ENST00000534373 ARHGEF35A5YM69 484 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 ARL5CA6NH57 179 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 LRRIQ4A6NIV6 560 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 NRP1O14786 923 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 NR1I2O75469 434 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 POMCP01189 267 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 PRPHP41219 470 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 NAMPTP43490 491 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 TOB1P50616 345 aaPredicted RBP14.83□□□□□ -0.04
CAPN1-228ENST00000534373 AFF1P51825 1210 aaKnown RBP14.83□□□□□ -0.04
CAPN1-228ENST00000534373 DSC1Q08554 894 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 PTGDRQ13258 359 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 PPP2R5AQ15172 486 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 CES5AQ6NT32 575 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 LLGL2Q6P1M3 1020 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 POTEGQ6S5H5 508 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 MAEAQ7L5Y9 396 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 NECTIN4Q96NY8 510 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 RNF39Q9H2S5 420 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 ADAM7Q9H2U9 754 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 GPRC5CQ9NQ84 441 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 DZANK1Q9NVP4 752 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 HCN4Q9Y3Q4 1203 aa14.83□□□□□ -0.04
CAPN1-228ENST00000534373 B4GALT3O60512 393 aa14.82□□□□□ -0.04
CAPN1-228ENST00000534373 CCT6AP40227 531 aaKnown RBP14.82□□□□□ -0.04
CAPN1-228ENST00000534373 RILPL1Q5EBL4 403 aa14.82□□□□□ -0.04
CAPN1-228ENST00000534373 COLGALT2Q8IYK4 626 aa14.82□□□□□ -0.04
CAPN1-228ENST00000534373 KCTD17Q8N5Z5 321 aa14.82□□□□□ -0.04
CAPN1-228ENST00000534373 BCL7CQ8WUZ0 217 aaPredicted RBP14.82□□□□□ -0.04
CAPN1-228ENST00000534373 KIFAP3Q92845 792 aa14.82□□□□□ -0.04
CAPN1-228ENST00000534373 TMX3Q96JJ7 454 aa14.82□□□□□ -0.04
CAPN1-228ENST00000534373 GAD1Q99259 594 aa14.82□□□□□ -0.04
CAPN1-228ENST00000534373 EMILIN2Q9BXX0 1053 aa14.82□□□□□ -0.04
CAPN1-228ENST00000534373 FAM86C2PA6NEL3 165 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 ACKR2O00590 384 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 B4GALT5O43286 388 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 LILRB3O75022 631 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 SOD2P04179 222 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 CA8P35219 290 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 MLH1P40692 756 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 EFNA5P52803 228 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 PTPN14Q15678 1187 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 MAPK6Q16659 721 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 KRT79Q5XKE5 535 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 DTHD1Q6ZMT9 781 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 GPR65Q8IYL9 337 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 SLC22A17Q8WUG5 538 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 EDAQ92838 391 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 RPGRIP1Q96KN7 1286 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 IFT74Q96LB3 600 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 COLEC11Q9BWP8 271 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 VN1R3Q9BXE9 311 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 BHMT2Q9H2M3 363 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.81□□□□□ -0.04
CAPN1-228ENST00000534373 MRPL17Q9NRX2 175 aaKnown RBP14.81□□□□□ -0.04
CAPN1-228ENST00000534373 MUTYHQ9UIF7 546 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 KIAA1024Q9UPX6 916 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 DNM3Q9UQ16 869 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 HES2Q9Y543 173 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 PCDHB6Q9Y5E3 794 aa14.81□□□□□ -0.04
CAPN1-228ENST00000534373 N4BP3O15049 544 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 EFEMP2O95967 443 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 C1RP00736 705 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 MTHFRP42898 656 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 OR1G1P47890 313 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 NBR1Q14596 966 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 ECM1Q16610 540 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 GSTCDQ8NEC7 633 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 DEPTORQ8TB45 409 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 SNX29Q8TEQ0 813 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 AUTS2Q8WXX7 1259 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 RIPOR3Q96MK2 946 aa14.8□□□□□ -0.04
CAPN1-228ENST00000534373 NXF3Q9H4D5 531 aaKnown RBP14.8□□□□□ -0.04
CAPN1-228ENST00000534373 MIOSQ9NXC5 875 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms