RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 FZD8Q9H461 694 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 PDZD7Q9H5P4 517 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 RSAD1Q9HA92 442 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 ENTPD7Q9NQZ7 604 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 AAASQ9NRG9 546 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 SNTG2Q9NY99 539 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 DACT1Q9NYF0 836 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 SMC3Q9UQE7 1217 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 USP15Q9Y4E8 981 aaPredicted RBP10.68□□□□□ -0.7
SSBP3-215ENST00000533946 CLIC4Q9Y696 253 aa10.68□□□□□ -0.7
SSBP3-215ENST00000533946 A0A1B0GUA9 196 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 ARHGEF35A5YM69 484 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 C19orf67A6NJJ6 358 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 PTGESO14684 152 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 ASAP2O43150 1006 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 LILRB3O75022 631 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 EFEMP2O95967 443 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 XRCC6P12956 609 aaKnown RBP eCLIP10.67□□□□□ -0.7
SSBP3-215ENST00000533946 ITGA4P13612 1032 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 TRAPPC10P48553 1259 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 MXD4Q14582 209 aaPredicted RBP10.67□□□□□ -0.7
SSBP3-215ENST00000533946 SMAD2Q15796 467 aaKnown RBP10.67□□□□□ -0.7
SSBP3-215ENST00000533946 SEZ6Q53EL9 994 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 ARSHQ5FYA8 562 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 LARP1BQ659C4 914 aaKnown RBP10.67□□□□□ -0.7
SSBP3-215ENST00000533946 RINT1Q6NUQ1 792 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 GLB1LQ6UWU2 654 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 C1orf186Q6ZWK4 172 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 TMC7Q7Z402 723 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 COLGALT2Q8IYK4 626 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 GJD3Q8N144 294 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 MRPL43Q8N983 215 aaKnown RBP10.67□□□□□ -0.7
SSBP3-215ENST00000533946 CHAMP1Q96JM3 812 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 JPH2Q9BR39 696 aaPredicted RBP10.67□□□□□ -0.7
SSBP3-215ENST00000533946 SMOC2Q9H3U7 446 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 CD207Q9UJ71 328 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 NOL7Q9UMY1 257 aaKnown RBP10.67□□□□□ -0.7
SSBP3-215ENST00000533946 GTF3C3Q9Y5Q9 886 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 MYO10Q9HD67 2058 aa10.67□□□□□ -0.7
SSBP3-215ENST00000533946 C2orf16Q68DN1 1984 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 TECTAO75443 2155 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 C2CD2LO14523 706 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 HIP1RO75146 1068 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 ERLIN2O94905 339 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 EYA4O95677 639 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 SPATA31D3P0C874 917 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 SSTR3P32745 418 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-215ENST00000533946 CA8P35219 290 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 CDC42EP1Q00587 391 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 RNASELQ05823 741 aaKnown RBP10.66□□□□□ -0.7
SSBP3-215ENST00000533946 DSC1Q08554 894 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 NAB2Q15742 525 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 CD300LGQ6UXG3 332 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 SPATA31D4Q6ZUB0 917 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 ZNF710Q8N1W2 664 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 SMRP1Q8NCR6 262 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 ST13P5Q8NFI4 369 aaPredicted RBP10.66□□□□□ -0.7
SSBP3-215ENST00000533946 HASPINQ8TF76 798 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 SLC22A17Q8WUG5 538 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 LRFN3Q9BTN0 628 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 GPR62Q9BZJ7 368 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 HAPLN2Q9GZV7 340 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 MUTYHQ9UIF7 546 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 HCFC2Q9Y5Z7 792 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 VWA8A3KMH1 1905 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 WDR87Q6ZQQ6 2873 aa10.66□□□□□ -0.7
SSBP3-215ENST00000533946 MYH11P35749 1972 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 VPS37CA5D8V6 355 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 CASTOR2A6NHX0 329 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 H3BQV1 296 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 ABLIM1O14639 778 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 HOXA2O43364 376 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 GAS2O43903 313 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 EIF5BO60841 1220 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 PRKCBP05771 671 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 CNPP09543 421 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 RPL17P18621 184 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 OR1G1P47890 313 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 NPTX2P47972 431 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 ALDH7A1P49419 539 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 PEX3P56589 373 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 OSTNP61366 133 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 CEBPZQ03701 1054 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 UBE3AQ05086 875 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 COASYQ13057 564 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 RESTQ13127 1097 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 SMAD4Q13485 552 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 TFDP1Q14186 410 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 PDIA5Q14554 519 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 DHX8Q14562 1220 aaKnown RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 PTPAQ15257 358 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 PTPN14Q15678 1187 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 GLRA4Q5JXX5 417 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
SSBP3-215ENST00000533946 ANKRD54Q6NXT1 300 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 NOTUMQ6P988 496 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 DTHD1Q6ZMT9 781 aa10.65□□□□□ -0.7
SSBP3-215ENST00000533946 DDX53Q86TM3 631 aaKnown RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms