RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 ABLIM1O14639 778 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 PSMA7O14818 248 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 MGEA5O60502 916 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 TOM1L1O75674 476 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 PROZP22891 400 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 CCNE1P24864 410 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 ADSSP30520 456 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 LIG4P49917 911 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 ZCWPW2Q504Y3 356 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 NOTUMQ6P988 496 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 C11orf57Q6ZUT1 292 aaPredicted RBP13.05□□□□□ -0.32
COMMD9-208ENST00000533643 CDR2LQ86X02 465 aaPredicted RBP13.05□□□□□ -0.32
COMMD9-208ENST00000533643 DBF4BQ8NFT6 615 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 NELFBQ8WX92 580 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 SEPT8Q92599 483 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 P2RX5Q93086 422 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 MED15Q96RN5 788 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 HAPLN2Q9GZV7 340 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 DNAJC25Q9H1X3 360 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 CHST12Q9NRB3 414 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 TYW1Q9NV66 732 aaKnown RBP13.05□□□□□ -0.32
COMMD9-208ENST00000533643 CTNND2Q9UQB3 1225 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 STYXL1Q9Y6J8 313 aa13.05□□□□□ -0.32
COMMD9-208ENST00000533643 A0A0B4J269 797 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 N4BP3O15049 544 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 RGS19P49795 217 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 PMS1P54277 932 aaKnown RBP13.04□□□□□ -0.32
COMMD9-208ENST00000533643 SNRPFP62306 86 aaKnown RBP13.04□□□□□ -0.32
COMMD9-208ENST00000533643 PAK1Q13153 545 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 ANO6Q4KMQ2 910 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 CT47A1Q5JQC4 288 aaPredicted RBP13.04□□□□□ -0.32
COMMD9-208ENST00000533643 UBXN11Q5T124 520 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 ANKRD40Q6AI12 368 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 MPZL3Q6UWV2 235 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 HS2ST1Q7LGA3 356 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 RTN4RL1Q86UN2 441 aaPredicted RBP13.04□□□□□ -0.32
COMMD9-208ENST00000533643 GOLGA5Q8TBA6 731 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 IL23AQ9NPF7 189 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 AGPAT3Q9NRZ7 376 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 CGNQ9P2M7 1197 aaKnown RBP13.04□□□□□ -0.32
COMMD9-208ENST00000533643 DACH1Q9UI36 760 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 RWDD2AQ9UIY3 292 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 TRAF3IP3Q9Y228 551 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 NR2E3Q9Y5X4 410 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 TANC1Q9C0D5 1861 aa13.04□□□□□ -0.32
COMMD9-208ENST00000533643 TRIM49BA6NDI0 452 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 CLIC2O15247 247 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 CLDN3O15551 220 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 ACRP10323 421 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 ZSCAN20P17040 1043 aaPredicted RBP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 GARTP22102 1010 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 ERCC5P28715 1186 aaPredicted RBP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 STX17P56962 302 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 ZNF445P59923 1031 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 FPGSQ05932 587 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 MCL1Q07820 350 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 PPIGQ13427 754 aaKnown RBP eCLIP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 NFIL3Q16649 462 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 TWF2Q6IBS0 349 aaKnown RBP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 SLFN12LQ6IEE8 588 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 TTI2Q6NXR4 508 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 CNKSR3Q6P9H4 555 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 SLC27A1Q6PCB7 646 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 LRSAM1Q6UWE0 723 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 FAM43BQ6ZT52 329 aaPredicted RBP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 C16orf59Q7L2K0 433 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 ZBTB33Q86T24 672 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 C12orf56Q8IXR9 622 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 RPUSD2Q8IZ73 545 aaKnown RBP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 LINC01599Q8WXQ3 324 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 APBB2Q92870 758 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 DUSP9Q99956 384 aaKnown RBP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 ADAM2Q99965 735 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 CBWD1Q9BRT8 395 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 FTHL17Q9BXU8 183 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 EIF2AQ9BY44 585 aaKnown RBP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 CDT1Q9H211 546 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 TSPYL2Q9H2G4 693 aaPredicted RBP13.03□□□□□ -0.32
COMMD9-208ENST00000533643 PCIF1Q9H4Z3 704 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 DMAC2Q9NW81 257 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 ANKFY1Q9P2R3 1169 aa13.03□□□□□ -0.32
COMMD9-208ENST00000533643 SCN5AQ14524 2016 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 ENPP3O14638 875 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 CALUO43852 315 aaPredicted RBP13.02□□□□□ -0.33
COMMD9-208ENST00000533643 CAPN15O75808 1086 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 NPTXRO95502 500 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 NR3C1P04150 777 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 MCF2P10911 925 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 MATR3P43243 847 aaKnown RBP eCLIP13.02□□□□□ -0.33
COMMD9-208ENST00000533643 CYP2J2P51589 502 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 EPHB4P54760 987 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 LRRC63Q05C16 580 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 NOLC1Q14978 699 aaKnown RBP eCLIP13.02□□□□□ -0.33
COMMD9-208ENST00000533643 EDRF1Q3B7T1 1238 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 DCAF4L1Q3SXM0 396 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 ZNF568Q3ZCX4 644 aa13.02□□□□□ -0.33
COMMD9-208ENST00000533643 ARMCX5Q6P1M9 558 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms