RNA–Protein interactions for RNA: ENST00000533595.5

SF3B2-214, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5

Gene SF3B2, Length 1,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-214ENST00000533595 TBX20Q9UMR3 447 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 USP20Q9Y2K6 914 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 INSL6Q9Y581 213 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.16
SF3B2-214ENST00000533595 SOX1O00570 391 aaPredicted RBP16.01■□□□□ 0.15
SF3B2-214ENST00000533595 PBX2P40425 430 aa16.01■□□□□ 0.15
SF3B2-214ENST00000533595 HTRA4P83105 476 aaPredicted RBP16.01■□□□□ 0.15
SF3B2-214ENST00000533595 ZC2HC1CQ53FD0 456 aaPredicted RBP16.01■□□□□ 0.15
SF3B2-214ENST00000533595 ZNF598Q86UK7 904 aaKnown RBP16.01■□□□□ 0.15
SF3B2-214ENST00000533595 HVCN1Q96D96 273 aa16.01■□□□□ 0.15
SF3B2-214ENST00000533595 TIGD1Q96MW7 591 aa16.01■□□□□ 0.15
SF3B2-214ENST00000533595 YME1L1Q96TA2 773 aa16.01■□□□□ 0.15
SF3B2-214ENST00000533595 ACO2Q99798 780 aaKnown RBP16.01■□□□□ 0.15
SF3B2-214ENST00000533595 ADPGKQ9BRR6 497 aa16.01■□□□□ 0.15
SF3B2-214ENST00000533595 TARS2Q9BW92 718 aaKnown RBP16.01■□□□□ 0.15
SF3B2-214ENST00000533595 EIF2AQ9BY44 585 aaKnown RBP16.01■□□□□ 0.15
SF3B2-214ENST00000533595 TRIM6Q9C030 488 aaPredicted RBP16.01■□□□□ 0.15
SF3B2-214ENST00000533595 TNFSF13BQ9Y275 285 aa16.01■□□□□ 0.15
SF3B2-214ENST00000533595 GOLGA6L22H0YM25 854 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 HOXA2O43364 376 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 KINO60870 393 aaKnown RBP16■□□□□ 0.15
SF3B2-214ENST00000533595 DGKIO75912 1065 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 GCNT3O95395 438 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 NPTXRO95502 500 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 MYOGP15173 224 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 ATF7P17544 494 aaPredicted RBP16■□□□□ 0.15
SF3B2-214ENST00000533595 DNAJB2P25686 324 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 ALCAMQ13740 583 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 POSTNQ15063 836 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 FAM26FQ5R3K3 315 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 ZPBP2Q6X784 338 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 APBB1IPQ7Z5R6 666 aaPredicted RBP16■□□□□ 0.15
SF3B2-214ENST00000533595 PGBD4Q96DM1 585 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 BICD1Q96G01 975 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 STRA6Q9BX79 667 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 YBX2Q9Y2T7 364 aaKnown RBP16■□□□□ 0.15
SF3B2-214ENST00000533595 PCDHB13Q9Y5F0 798 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 CHD9Q3L8U1 2897 aa16■□□□□ 0.15
SF3B2-214ENST00000533595 GBF1Q92538 1859 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 KLRC4O43908 158 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 PPP1R37O75864 691 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 MYBP10242 640 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 FGFR1P11362 822 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 CASP5P51878 434 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 EHHADHQ08426 723 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 DPYDQ12882 1025 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 DCAF4L1Q3SXM0 396 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 EEF1DP3Q658K8 133 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 STXBP4Q6ZWJ1 553 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 MRPL10Q7Z7H8 261 aaKnown RBP15.99■□□□□ 0.15
SF3B2-214ENST00000533595 MAP4K3Q8IVH8 894 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 HACE1Q8IYU2 909 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 SMG8Q8ND04 991 aaKnown RBP15.99■□□□□ 0.15
SF3B2-214ENST00000533595 LPPQ93052 612 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 HPS3Q969F9 1004 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 CCDC47Q96A33 483 aaKnown RBP15.99■□□□□ 0.15
SF3B2-214ENST00000533595 TIFAQ96CG3 184 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 ZNF689Q96CS4 500 aaPredicted RBP15.99■□□□□ 0.15
SF3B2-214ENST00000533595 TCHPQ9BT92 498 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 NKX2-4Q9H2Z4 354 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 RC3H2Q9HBD1 1191 aaKnown RBP15.99■□□□□ 0.15
SF3B2-214ENST00000533595 PTPRHQ9HD43 1115 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 EXOC1Q9NV70 894 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 HOOK1Q9UJC3 728 aaKnown RBP15.99■□□□□ 0.15
SF3B2-214ENST00000533595 IPPQ9Y573 584 aa15.99■□□□□ 0.15
SF3B2-214ENST00000533595 HNRNPDLO14979 420 aaKnown RBP15.98■□□□□ 0.15
SF3B2-214ENST00000533595 TOM1L1O75674 476 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 PIGRP01833 764 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 RPN1P04843 607 aaKnown RBP15.98■□□□□ 0.15
SF3B2-214ENST00000533595 CA3P07451 260 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 ITGA4P13612 1032 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 LIG4P49917 911 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 GATMP50440 423 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 ZNF568Q3ZCX4 644 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 KMT5BQ4FZB7 885 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 L1TD1Q5T7N2 865 aaKnown RBP15.98■□□□□ 0.15
SF3B2-214ENST00000533595 MPZL3Q6UWV2 235 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 ABI1Q8IZP0 508 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
SF3B2-214ENST00000533595 LRCH3Q96II8 777 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 ACCSQ96QU6 501 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 FGFBP2Q9BYJ0 223 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 TMEM117Q9H0C3 514 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 NXF3Q9H4D5 531 aaKnown RBP15.98■□□□□ 0.15
SF3B2-214ENST00000533595 LMBRD1Q9NUN5 540 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 RNF19AQ9NV58 838 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 EXOC7Q9UPT5 735 aa15.98■□□□□ 0.15
SF3B2-214ENST00000533595 LCHNA4D1U4 455 aa15.97■□□□□ 0.15
SF3B2-214ENST00000533595 TBKBP1A7MCY6 615 aa15.97■□□□□ 0.15
SF3B2-214ENST00000533595 PROZP22891 400 aa15.97■□□□□ 0.15
SF3B2-214ENST00000533595 MATR3P43243 847 aaKnown RBP eCLIP15.97■□□□□ 0.15
SF3B2-214ENST00000533595 PSMD2Q13200 908 aa15.97■□□□□ 0.15
SF3B2-214ENST00000533595 PNOCQ13519 176 aa15.97■□□□□ 0.15
SF3B2-214ENST00000533595 BTG3Q14201 252 aaPredicted RBP15.97■□□□□ 0.15
SF3B2-214ENST00000533595 PAN2Q504Q3 1202 aaKnown RBP15.97■□□□□ 0.15
SF3B2-214ENST00000533595 CLLU1OSQ5K130 101 aa15.97■□□□□ 0.15
SF3B2-214ENST00000533595 GLB1LQ6UWU2 654 aa15.97■□□□□ 0.15
SF3B2-214ENST00000533595 AGMOQ6ZNB7 445 aa15.97■□□□□ 0.15
SF3B2-214ENST00000533595 ZBTB33Q86T24 672 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms