RNA–Protein interactions for RNA: ENST00000533533.5

COPB1-210, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-210ENST00000533533 A0A087WZ62 844 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 TMEM150BA6NC51 233 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 MEIS3P2A8K0S8 358 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 TBX3O15119 743 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 ZNF623O75123 536 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 STBD1O95210 358 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 GALTP07902 379 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 U2AF2P26368 475 aaKnown RBP eCLIP9.7□□□□□ -0.867e-14■■□□□ 13.2
COPB1-210ENST00000533533 DNM2P50570 870 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 RNASELQ05823 741 aaKnown RBP9.7□□□□□ -0.86
COPB1-210ENST00000533533 LONRF3Q496Y0 759 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 MTERF2Q49AM1 385 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 NOMO2Q5JPE7 1267 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 ASCL5Q7RTU5 278 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 FERMT3Q86UX7 667 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 CABP7Q86V35 215 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 ZNF410Q86VK4 478 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 PPFIBP1Q86W92 1011 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 RDM1Q8NG50 284 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 BCL7CQ8WUZ0 217 aaPredicted RBP9.7□□□□□ -0.86
COPB1-210ENST00000533533 HAS1Q92839 578 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 INTS4Q96HW7 963 aaKnown RBP9.7□□□□□ -0.86
COPB1-210ENST00000533533 SH2D3AQ9BRG2 576 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 FDXACB1Q9BRP7 624 aaPredicted RBP9.7□□□□□ -0.86
COPB1-210ENST00000533533 INO80BQ9C086 356 aaPredicted RBP9.7□□□□□ -0.86
COPB1-210ENST00000533533 TMEM60Q9H2L4 133 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 MFSD1Q9H3U5 465 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 TTC12Q9H892 705 aaPredicted RBP9.7□□□□□ -0.86
COPB1-210ENST00000533533 CYP26B1Q9NR63 512 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 FAM105AQ9NUU6 356 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 SUCLA2Q9P2R7 463 aaPredicted RBP9.7□□□□□ -0.86
COPB1-210ENST00000533533 PIN4Q9Y237 131 aaKnown RBP9.7□□□□□ -0.86
COPB1-210ENST00000533533 INPP5FQ9Y2H2 1132 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 FRYLO94915 3013 aa9.7□□□□□ -0.86
COPB1-210ENST00000533533 DMXL1Q9Y485 3027 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 PRR23AA6NEV1 266 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 DDX11L8A8MPP1 907 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 TDRD15B5MCY1 1934 aaKnown RBP9.69□□□□□ -0.86
COPB1-210ENST00000533533 EML1O00423 815 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 MAFO75444 373 aaPredicted RBP9.69□□□□□ -0.86
COPB1-210ENST00000533533 OFD1O75665 1012 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 OR52Z1P0C646 297 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 TRAPPC10P48553 1259 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 SLC11A1P49279 550 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 RAB27AP51159 221 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 CLCN5P51795 746 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 CYP4A11Q02928 519 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 PPP2R5CQ13362 524 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 PTPN14Q15678 1187 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 B3GNT9Q6UX72 402 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 TMC5Q6UXY8 1006 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 OTOP3Q7RTS5 596 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 CATSPER4Q7RTX7 472 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 GPR149Q86SP6 731 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 RHPN2Q8IUC4 686 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 FEZF2Q8TBJ5 459 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
COPB1-210ENST00000533533 VN1R3Q9BXE9 311 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 GBP3Q9H0R5 595 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 SFXN1Q9H9B4 322 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 DNAJB4Q9UDY4 337 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 STK39Q9UEW8 545 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 VAV3Q9UKW4 847 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 PCDHB6Q9Y5E3 794 aa9.69□□□□□ -0.86
COPB1-210ENST00000533533 CACNA1BQ00975 2339 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 B4GALT3O60512 393 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 DKC1O60832 514 aaKnown RBP eCLIP9.68□□□□□ -0.86
COPB1-210ENST00000533533 SYT1P21579 422 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 QARSP47897 775 aaKnown RBP9.68□□□□□ -0.86
COPB1-210ENST00000533533 CLCN4P51793 760 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 PSMC5P62195 406 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 FOXK2Q01167 660 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 CTTNQ14247 550 aaKnown RBP9.68□□□□□ -0.86
COPB1-210ENST00000533533 EPHA7Q15375 998 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 RILPL1Q5EBL4 403 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 FOXD4L5Q5VV16 416 aaPredicted RBP9.68□□□□□ -0.86
COPB1-210ENST00000533533 AGMOQ6ZNB7 445 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 CCDC149Q6ZUS6 474 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 ANO5Q75V66 913 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 FRMD5Q7Z6J6 570 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 ZNF280BQ86YH2 543 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 KSR1Q8IVT5 923 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 TPH2Q8IWU9 490 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 FOXD4L4Q8WXT5 416 aaPredicted RBP9.68□□□□□ -0.86
COPB1-210ENST00000533533 PGBD4Q96DM1 585 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 DYDC2Q96IM9 177 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 NLRP4Q96MN2 994 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 CCDC43Q96MW1 224 aaKnown RBP9.68□□□□□ -0.86
COPB1-210ENST00000533533 KLHL5Q96PQ7 755 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 JPH2Q9BR39 696 aaPredicted RBP9.68□□□□□ -0.86
COPB1-210ENST00000533533 EMILIN2Q9BXX0 1053 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 IFT122Q9HBG6 1241 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 RGL1Q9NZL6 768 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 PCDHB2Q9Y5E7 798 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 EPG5Q9HCE0 2579 aa9.68□□□□□ -0.86
COPB1-210ENST00000533533 POTEMA6NI47 508 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 LILRB3O75022 631 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 DDHD2O94830 711 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 ALDH2P05091 517 aa9.67□□□□□ -0.86
COPB1-210ENST00000533533 SSBP05455 408 aaKnown RBP eCLIP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms