RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 CDCA2Q69YH5 1023 aaPredicted RBP12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 SLC27A1Q6PCB7 646 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 C1orf186Q6ZWK4 172 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 CRIPAKQ8N1N5 446 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 KCTD17Q8N5Z5 321 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 SYT2Q8N9I0 419 aaPredicted RBP12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 LINC00301Q8NCQ3 95 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 CCDC51Q96ER9 411 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 ADPGKQ9BRR6 497 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 TIPINQ9BVW5 301 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 ALG13Q9NP73 1137 aaKnown RBP12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 CFAP45Q9UL16 551 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 USP20Q9Y2K6 914 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 MTCH2Q9Y6C9 303 aa12.64□□□□□ -0.39
UBASH3B-208ENST00000533451 CNTNAP2Q9UHC6 1331 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 MEIS3P2A8K0S8 358 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 H3BNC9 293 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 K7ERI5 159 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 N4BP3O15049 544 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 ZC3H11AO75152 810 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 RB1P06400 928 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 LAG3P18627 525 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 GUCY2CP25092 1073 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 CA8P35219 290 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 PBX3P40426 434 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 MATR3P43243 847 aaKnown RBP eCLIP12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 NPTX2P47972 431 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 STRN3Q13033 797 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 UBXN11Q5T124 520 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 CCDC73Q6ZRK6 1079 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 ZNF598Q86UK7 904 aaKnown RBP12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 MYCT1Q8N699 235 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 KLHL23Q8NBE8 558 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 COLGALT1Q8NBJ5 622 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 KCNG4Q8TDN1 519 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 CLP1Q92989 425 aaKnown RBP12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 PRIMPOLQ96LW4 560 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 ZNF558Q96NG5 402 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 CASD1Q96PB1 797 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 FAM193BQ96PV7 902 aaPredicted RBP12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 REEP2Q9BRK0 252 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 TRAIPQ9BWF2 469 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 CCSER1Q9C0I3 900 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 NXF3Q9H4D5 531 aaKnown RBP12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 RSAD1Q9HA92 442 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 BLOC1S4Q9NUP1 217 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 RNF19AQ9NV58 838 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 KCND2Q9NZV8 630 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 CHD7Q9P2D1 2997 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 STK17AQ9UEE5 414 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 PARP2Q9UGN5 583 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 HES2Q9Y543 173 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 IPPQ9Y573 584 aa12.63□□□□□ -0.39
UBASH3B-208ENST00000533451 PHLPP2Q6ZVD8 1323 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 TDRD15B5MCY1 1934 aaKnown RBP12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 PLXNA4Q9HCM2 1894 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 K7ENM7 598 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 LPXNO60711 386 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 CUTAO60888 179 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 HARSP12081 509 aaKnown RBP12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 PLS3P13797 630 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 AMHR2Q16671 573 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 TIGD5Q53EQ6 642 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 NOMO2Q5JPE7 1267 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 SV2BQ7L1I2 683 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 DYMQ7RTS9 669 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 DAW1Q8N136 415 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 SLC17A8Q8NDX2 589 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 CNNM3Q8NE01 707 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 MICAL1Q8TDZ2 1067 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 MARVELD3Q96A59 401 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 MRPL38Q96DV4 380 aaKnown RBP12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 BICD1Q96G01 975 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 TCHPQ9BT92 498 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 PLVAPQ9BX97 442 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 CCDC113Q9H0I3 377 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 LARSQ9P2J5 1176 aaKnown RBP12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 ATP6V1DQ9Y5K8 247 aa12.62□□□□□ -0.39
UBASH3B-208ENST00000533451 TCHHQ07283 1943 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ACKR2O00590 384 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 GRM6O15303 877 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ZNF623O75123 536 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 PPP6R2O75170 966 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 BRD1O95696 1058 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 POMCP01189 267 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ITGB1P05556 798 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 AKAP5P24588 427 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 DDIT3P35638 169 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 MLH1P40692 756 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ALDH7A1P49419 539 aaKnown RBP12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 KRT85P78386 507 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 MAPK7Q13164 816 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ATF7IP2Q5U623 682 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ATL3Q6DD88 541 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 ZBTB33Q86T24 672 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 SMG8Q8ND04 991 aaKnown RBP12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 LRRC15Q8TF66 581 aa12.61□□□□□ -0.39
UBASH3B-208ENST00000533451 DHX58Q96C10 678 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms