RNA–Protein interactions for RNA: ENST00000533131.5

BDNF-217, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-217ENST00000533131 PGBD2Q6P3X8 592 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 ARHGAP11AQ6P4F7 1023 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 SLC30A9Q6PML9 568 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 CLEC17AQ6ZS10 378 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 CEP68Q76N32 757 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 GJD3Q8N144 294 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 AHI1Q8N157 1196 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 COL26A1Q96A83 441 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 MAP3K5Q99683 1374 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 ARMT1Q9H993 441 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 SETD1AO15047 1707 aaKnown RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 RGS12O14924 1447 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 A0A1W2PPL8 197 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 HMX3A6NHT5 357 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 TAF4O00268 1085 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 CYP1A2P05177 515 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 OSMP13725 252 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 TECP42680 631 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 BLVRAP53004 296 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 SLC10A5Q5PT55 438 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 BEND3Q5T5X7 828 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 ZNF574Q6ZN55 896 aaPredicted RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 B4GALNT4Q76KP1 1039 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 BICD1Q96G01 975 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 CCDC43Q96MW1 224 aaKnown RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 MKNK2Q9HBH9 465 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 RAB6BQ9NRW1 208 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 GJB4Q9NTQ9 266 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 CWC15Q9P013 229 aaKnown RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 MED14O60244 1454 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 ARHGAP31Q2M1Z3 1444 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 PNPLA6Q8IY17 1366 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 A0A087WV62 115 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 KLF18A0A0U1RQI7 1052 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 CACNB4O00305 520 aaPredicted RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 USO1O60763 962 aaKnown RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 RTN3O95197 1032 aaPredicted RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 TATP17735 454 aaPredicted RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 ITGA8P53708 1063 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 COL9A3Q14050 684 aaPredicted RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 ARL13BQ3SXY8 428 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 FNIP1Q8TF40 1166 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 NSRP1Q9H0G5 558 aaKnown RBP7.38□□□□□ -1.23
BDNF-217ENST00000533131 TCP11L1Q9NUJ3 509 aa7.38□□□□□ -1.23
BDNF-217ENST00000533131 ARHGAP23Q9P227 1491 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 ATP10DQ9P241 1426 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 KIAA0232Q92628 1395 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 TRBV23-1A0A0A0MS06 115 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 TULP2O00295 520 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 MAFKO60675 156 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 LIN54Q6MZP7 749 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 SYTL1Q8IYJ3 562 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 LINS1Q8NG48 757 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 NANOS1Q8WY41 292 aaKnown RBP7.37□□□□□ -1.23
BDNF-217ENST00000533131 DHX58Q96C10 678 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 HIC2Q96JB3 615 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 WDR24Q96S15 920 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 SRP68Q9UHB9 627 aaKnown RBP7.37□□□□□ -1.23
BDNF-217ENST00000533131 SRCAPQ6ZRS2 3230 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 BLACEA4D250 179 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 LRRC14BA6NHZ5 514 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 A8MVJ9 347 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 AP5Z1O43299 807 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 GJB3O75712 270 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 GRIK1P39086 918 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 MSH2P43246 934 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 MAGEA8P43361 318 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 GTF2H3Q13889 308 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 C11orf57Q6ZUT1 292 aaPredicted RBP7.37□□□□□ -1.23
BDNF-217ENST00000533131 RETREG3Q86VR2 466 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 LSRQ86X29 649 aaPredicted RBP7.37□□□□□ -1.23
BDNF-217ENST00000533131 REXO1Q8N1G1 1221 aaKnown RBP7.37□□□□□ -1.23
BDNF-217ENST00000533131 JMYQ8N9B5 988 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 IQCDQ96DY2 449 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 RBM14Q96PK6 669 aaKnown RBP7.37□□□□□ -1.23
BDNF-217ENST00000533131 USP28Q96RU2 1077 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 ISCA1Q9BUE6 129 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 NT5C1AQ9BXI3 368 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 CNNM1Q9NRU3 951 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 SLIT1O75093 1534 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 TTC41PQ6P2S7 1318 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 SLC10A3P09131 477 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 NPR3P17342 541 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 ZNF438Q7Z4V0 828 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 TOR1AIP2Q8NFQ8 470 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 CENPIQ92674 756 aaPredicted RBP7.37□□□□□ -1.23
BDNF-217ENST00000533131 DDX17Q92841 729 aaKnown RBP7.37□□□□□ -1.23
BDNF-217ENST00000533131 KCNF1Q9H3M0 494 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 CLSTN2Q9H4D0 955 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 ZFYVE28Q9HCC9 887 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 ABCB6Q9NP58 842 aa7.37□□□□□ -1.23
BDNF-217ENST00000533131 IKBKBO14920 756 aa7.36□□□□□ -1.23
BDNF-217ENST00000533131 SLC7A4O43246 635 aa7.36□□□□□ -1.23
BDNF-217ENST00000533131 ARAFP10398 606 aa7.36□□□□□ -1.23
BDNF-217ENST00000533131 PPARGP37231 505 aaPredicted RBP7.36□□□□□ -1.23
BDNF-217ENST00000533131 PIK3CBP42338 1070 aa7.36□□□□□ -1.23
BDNF-217ENST00000533131 MCMDC2Q4G0Z9 681 aa7.36□□□□□ -1.23
BDNF-217ENST00000533131 SH3PXD2AQ5TCZ1 1133 aa7.36□□□□□ -1.23
BDNF-217ENST00000533131 TLDC1Q6P9B6 456 aa7.36□□□□□ -1.23
BDNF-217ENST00000533131 TTC13Q8NBP0 860 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms