RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-223ENST00000532793 CNNM3Q8NE01 707 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 MTRQ99707 1265 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 LXNQ9BS40 222 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 EMILIN2Q9BXX0 1053 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 ZSWIM4Q9H7M6 989 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 RSAD1Q9HA92 442 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 KCNMB3Q9NPA1 279 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 AGPAT5Q9NUQ2 364 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 TBC1D13Q9NVG8 400 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 ORC3Q9UBD5 711 aaPredicted RBP10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 DBR1Q9UK59 544 aaKnown RBP10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 PCDHB2Q9Y5E7 798 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 CNTNAP2Q9UHC6 1331 aa10.75□□□□□ -0.69
PPFIA1-223ENST00000532793 EML1O00423 815 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 PFKFB2O60825 505 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 CLASP2O75122 1294 aaKnown RBP10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 ZNF623O75123 536 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 NR1I2O75469 434 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 STBD1O95210 358 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 CTSAP10619 480 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 NHLH1Q02575 133 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 CYP4A11Q02928 519 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 MTMR3Q13615 1198 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 KCNC3Q14003 757 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 EMC2Q15006 297 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 NPY5RQ15761 445 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 PTPN21Q16825 1174 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 ATAT1Q5SQI0 421 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 SYCE2Q6PIF2 218 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 TPH2Q8IWU9 490 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 HACE1Q8IYU2 909 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 FBXL6Q8N531 539 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 TDRD5Q8NAT2 981 aaKnown RBP10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 RNF149Q8NC42 400 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 TMEM143Q96AN5 459 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 IGSF21Q96ID5 467 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 CEP89Q96ST8 783 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 TRIM6Q9C030 488 aaPredicted RBP10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 ZBP1Q9H171 429 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 S1PR5Q9H228 398 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 ADAM7Q9H2U9 754 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 NRDE2Q9H7Z3 1164 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 UBN1Q9NPG3 1134 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 VAV3Q9UKW4 847 aa10.74□□□□□ -0.69
PPFIA1-223ENST00000532793 OFD1O75665 1012 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 ALDH2P05091 517 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 GALTP07902 379 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 ITGA4P13612 1032 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 MRE11P49959 708 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 ANAPC15P60006 121 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 LAMTOR4Q0VGL1 99 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 CTTNQ14247 550 aaKnown RBP10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 MXD4Q14582 209 aaPredicted RBP10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 PCBP1Q15365 356 aaKnown RBP eCLIP10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 RARS2Q5T160 578 aaKnown RBP10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 CABP7Q86V35 215 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 PRPF31Q8WWY3 499 aaKnown RBP10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 DYDC2Q96IM9 177 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 TMEM175Q9BSA9 504 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 IRF2BPLQ9H1B7 796 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 DHX33Q9H6R0 707 aaKnown RBP10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 IFT122Q9HBG6 1241 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 MRPL17Q9NRX2 175 aaKnown RBP10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 TPCN1Q9ULQ1 816 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 PCDHA12Q9UN75 941 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 SORCS3Q9UPU3 1222 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 SSX2IPQ9Y2D8 614 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 FAN1Q9Y2M0 1017 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 IRAK3Q9Y616 596 aa10.73□□□□□ -0.69
PPFIA1-223ENST00000532793 TECTAO75443 2155 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 INO80B-WBP1J3KQ70 363 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 SSBP05455 408 aaKnown RBP eCLIP10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 URODP06132 367 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 KLRC2P26717 231 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 AXLP30530 894 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 AK2P54819 239 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 CALCRLQ16602 461 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 KIAA1841Q6NSI8 718 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 NOTUMQ6P988 496 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 FERMT3Q86UX7 667 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 UBALD2Q8IYN6 164 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 AUTS2Q8WXX7 1259 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 ACSF2Q96CM8 615 aaPredicted RBP10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 POMKQ9H5K3 350 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 SFXN1Q9H9B4 322 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 RGL1Q9NZL6 768 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 DNAJB4Q9UDY4 337 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 DPP7Q9UHL4 492 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 DENND4AQ7Z401 1863 aa10.72□□□□□ -0.69
PPFIA1-223ENST00000532793 MEIS3P2A8K0S8 358 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 NEMFO60524 1076 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 DGAT1O75907 488 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 POMCP01189 267 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 NCLP19338 710 aaKnown RBP10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 SLC11A1P49279 550 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 SAFBQ15424 915 aaKnown RBP eCLIP10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 TMEM132AQ24JP5 1023 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 C2orf16Q68DN1 1984 aa10.71□□□□□ -0.69
PPFIA1-223ENST00000532793 AGMOQ6ZNB7 445 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms