RNA–Protein interactions for RNA: ENST00000529938.1

AP002884.3-204, humanhuman

TSL 1 (best)

Gene AP002884.3, Length 1,166 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002884.3-204ENST00000529938 CWH43Q9H720 699 aa16.65■□□□□ 0.26
AP002884.3-204ENST00000529938 MINDY3Q9H8M7 445 aa16.65■□□□□ 0.26
AP002884.3-204ENST00000529938 ENTPD7Q9NQZ7 604 aa16.65■□□□□ 0.26
AP002884.3-204ENST00000529938 ANKEF1Q9NU02 776 aa16.65■□□□□ 0.26
AP002884.3-204ENST00000529938 DACT1Q9NYF0 836 aa16.65■□□□□ 0.26
AP002884.3-204ENST00000529938 NOL7Q9UMY1 257 aaKnown RBP16.65■□□□□ 0.26
AP002884.3-204ENST00000529938 GJB2P29033 226 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 MTHFRP42898 656 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 PHKA2P46019 1235 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 TRAPPC10P48553 1259 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 RARRES1P49788 294 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 ORC2Q13416 577 aaPredicted RBP16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 CLLU1OSQ5K130 101 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 ZNF598Q86UK7 904 aaKnown RBP16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 ABI1Q8IZP0 508 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 PLCD3Q8N3E9 789 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 LPPQ93052 612 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 CCDC43Q96MW1 224 aaKnown RBP16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 RTP3Q9BQQ7 232 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 PCDHB6Q9Y5E3 794 aa16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 FNDC1Q4ZHG4 1894 aaPredicted RBP16.64■□□□□ 0.25
AP002884.3-204ENST00000529938 ACACBO00763 2458 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 KMT2BQ9UMN6 2715 aaPredicted RBP16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 ASAP2O43150 1006 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 HOXA2O43364 376 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 GAS2O43903 313 aaKnown RBP16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 DGAT1O75907 488 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 EOMESO95936 686 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 LAG3P18627 525 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 MAEAQ7L5Y9 396 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 SRGAP1Q7Z6B7 1085 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 TDRD5Q8NAT2 981 aaKnown RBP16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 HELQQ8TDG4 1101 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 ASAP3Q8TDY4 903 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 TUFT1Q9NNX1 390 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 DLL3Q9NYJ7 618 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 KIF3AQ9Y496 699 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 HCFC2Q9Y5Z7 792 aa16.63■□□□□ 0.25
AP002884.3-204ENST00000529938 MEIS3P2A8K0S8 358 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 USO1O60763 962 aaKnown RBP16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 XRCC6P12956 609 aaKnown RBP eCLIP16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 HOXA11P31270 313 aaPredicted RBP16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 ARL2P36404 184 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 PBX3P40426 434 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 MCM2P49736 904 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 PTGDRQ13258 359 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 POTEGQ6S5H5 508 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 POLR3CQ9BUI4 534 aaPredicted RBP16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 AGPAT5Q9NUQ2 364 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 FAM105AQ9NUU6 356 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 USTQ9Y2C2 406 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 OTOGLQ3ZCN5 2332 aa16.62■□□□□ 0.25
AP002884.3-204ENST00000529938 H3BQV1 296 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 WEE2P0C1S8 567 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 GLRA2P23416 452 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 RPA1P27694 616 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 PTENP60484 403 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 MXD4Q14582 209 aaPredicted RBP16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 ECM1Q16610 540 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 TMC7Q7Z402 723 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 LRRC43Q8N309 656 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 ERMNQ8TAM6 284 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 NACC1Q96RE7 527 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 TRAIPQ9BWF2 469 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 GPRC5CQ9NQ84 441 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 SMC3Q9UQE7 1217 aa16.61■□□□□ 0.25
AP002884.3-204ENST00000529938 INO80B-WBP1J3KQ70 363 aa16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 FXR2P51116 673 aaKnown RBP eCLIP16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 KRT17Q04695 432 aa16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 CAPSQ13938 189 aa16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 ATAT1Q5SQI0 421 aa16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 KCNT2Q6UVM3 1135 aa16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 MRPL43Q8N983 215 aaKnown RBP16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 POLR3FQ9H1D9 316 aaPredicted RBP16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 LRWD1Q9UFC0 647 aa16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 DBR1Q9UK59 544 aaKnown RBP16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 PCDHB2Q9Y5E7 798 aa16.6■□□□□ 0.25
AP002884.3-204ENST00000529938 SPTBN2O15020 2390 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 C2orf71A6NGG8 1288 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 NT5C1B-RDH14C9J2C7 533 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 CLASP2O75122 1294 aaKnown RBP16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 ZNF623O75123 536 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 SKIP12755 728 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 CCT6AP40227 531 aaKnown RBP16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 TFDP1Q14186 410 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 IL17AQ16552 155 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 UBXN11Q5T124 520 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 RARS2Q5T160 578 aaKnown RBP16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 KIAA1841Q6NSI8 718 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 C12orf76Q8N812 135 aaPredicted RBP16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 CPB2Q96IY4 423 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 ZNF558Q96NG5 402 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 BACH2Q9BYV9 841 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 POLD4Q9HCU8 107 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 INPP5FQ9Y2H2 1132 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 R4GN57 208 aa16.59■□□□□ 0.25
AP002884.3-204ENST00000529938 TSPAN1O60635 241 aa16.58■□□□□ 0.24
AP002884.3-204ENST00000529938 OFD1O75665 1012 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms