RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 SNF8Q96H20 258 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 TGS1Q96RS0 853 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ADAM33Q9BZ11 813 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 SIK2Q9H0K1 926 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 AGO2Q9UKV8 859 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 EIF4E1BA6NMX2 242 aaKnown RBP8.64□□□□□ -1.03
CTNND1-220ENST00000529526 H3BRJ5 948 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 SKIP12755 728 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 PPP2R2AP63151 447 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ANKMY2Q8IV38 441 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 MORC4Q8TE76 937 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 TRIM15Q9C019 465 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 TMEM60Q9H2L4 133 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ACAD9Q9H845 621 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 CYP26B1Q9NR63 512 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 MRFAP1Q9Y605 127 aa8.64□□□□□ -1.03
CTNND1-220ENST00000529526 ZNF609O15014 1411 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 DIAPH2O60879 1101 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 PPARGP37231 505 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 RCAN1P53805 252 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 MDM2Q00987 491 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 CAPRIN1Q14444 709 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 MXD4Q14582 209 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 NFIXQ14938 502 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 PDCD2Q16342 344 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 MMTAG2Q9BU76 263 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 TRPV6Q9H1D0 765 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 UPF3AQ9H1J1 476 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 ALG13Q9NP73 1137 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 HPCAL4Q9UM19 191 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 GRID2IPA4D2P6 1211 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 ORC4O43929 436 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 HMGCS2P54868 508 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 SH3BGRP55822 239 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 KRT17Q04695 432 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 FMR1Q06787 632 aaKnown RBP eCLIP8.63□□□□□ -1.031e-6■■■■□ 23.3
CTNND1-220ENST00000529526 LRRC31Q6UY01 552 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 SLC30A5Q8TAD4 765 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 RAPGEF5Q92565 580 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 PPP1R36Q96LQ0 422 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 WDR24Q96S15 920 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 WNT8AQ9H1J5 351 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 ZCCHC17Q9NP64 241 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 FAM8A1Q9UBU6 413 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 AFF4Q9UHB7 1163 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 CDC42BPBQ9Y5S2 1711 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 IQGAP3Q86VI3 1631 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 ACAD11Q709F0 780 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 HAUS6Q7Z4H7 955 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 URGCPQ8TCY9 931 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 NSUN4Q96CB9 384 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 ZBTB18Q99592 522 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 AGPAT1Q99943 283 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 C2orf40Q9H1Z8 148 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 SP110Q9HB58 689 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 RNF181Q9P0P0 153 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 SUN2Q9UH99 717 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 L3MBTL1Q9Y468 752 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 CHD1O14646 1710 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 TNS3Q68CZ2 1445 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 TERF2Q15554 542 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 RBBP7Q16576 425 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 DCAF4L1Q3SXM0 396 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 C12orf60Q5U649 245 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 IZUMO3Q5VZ72 239 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 GUF1Q8N442 669 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 GIPC2Q8TF65 315 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 CPA5Q8WXQ8 436 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 TAF1DQ9H5J8 278 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 ECT2Q9H8V3 914 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 AMACRQ9UHK6 382 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 FBXL5Q9UKA1 691 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 SLC13A4Q9UKG4 626 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 CAPN11Q9UMQ6 739 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 KPNA7A9QM74 516 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 ANP32DO95626 131 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 MYBL1P10243 752 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 HSPA8P11142 646 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 BRAFP15056 766 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 CHRNA3P32297 505 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 CAV1Q03135 178 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 TMED1Q13445 227 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 IMPG1Q17R60 797 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 SLC10A5Q5PT55 438 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 C1orf146Q5VVC0 180 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 SGMS1Q86VZ5 419 aa8.63□□□□□ -1.03
CTNND1-220ENST00000529526 SCAF8Q9UPN6 1271 aaKnown RBP8.63□□□□□ -1.03
CTNND1-220ENST00000529526 EEF1DP29692 281 aaKnown RBP8.62□□□□□ -1.03
CTNND1-220ENST00000529526 NT5C2P49902 561 aa8.62□□□□□ -1.03
CTNND1-220ENST00000529526 ARSEP51690 589 aa8.62□□□□□ -1.03
CTNND1-220ENST00000529526 USP11P51784 963 aa8.62□□□□□ -1.03
CTNND1-220ENST00000529526 ARHGDIAP52565 204 aa8.62□□□□□ -1.03
CTNND1-220ENST00000529526 CDH6P55285 790 aa8.62□□□□□ -1.03
CTNND1-220ENST00000529526 MKRN4PQ13434 485 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-220ENST00000529526 APOBEC3FQ8IUX4 373 aaKnown RBP8.62□□□□□ -1.03
CTNND1-220ENST00000529526 RHOT1Q8IXI2 618 aa8.62□□□□□ -1.03
CTNND1-220ENST00000529526 NDUFAF2Q8N183 169 aa8.62□□□□□ -1.03
CTNND1-220ENST00000529526 RNF149Q8NC42 400 aa8.62□□□□□ -1.03
CTNND1-220ENST00000529526 ARL8AQ96BM9 186 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms