RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 SEMA4AQ9H3S1 761 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 MS4A5Q9H3V2 200 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 VTA1Q9NP79 307 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 SLC5A4Q9NY91 659 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 JAG2Q9Y219 1238 aa6.43□□□□□ -1.38
CSDE1-212ENST00000529046 ROBO1Q9Y6N7 1651 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 RRBP1Q9P2E9 1410 aaKnown RBP6.42□□□□□ -1.38
CSDE1-212ENST00000529046 TRPM2O94759 1503 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 ELL2O00472 640 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-212ENST00000529046 ZNF888P0CJ79 500 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-212ENST00000529046 ZNF20P17024 532 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 IGBP1P78318 339 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 TMPRSS15P98073 1019 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 SLC6A3Q01959 620 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 ICAM4Q14773 271 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 PDCD1Q15116 288 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 TMEM200BQ69YZ2 307 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 CXorf67Q86X51 503 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-212ENST00000529046 CBARPQ8N350 705 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-212ENST00000529046 CALML6Q8TD86 181 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 DVL3Q92997 716 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-212ENST00000529046 C1QTNF3Q9BXJ4 246 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 SEC61A2Q9H9S3 476 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 TOPORSQ9NS56 1045 aaPredicted RBP6.42□□□□□ -1.38
CSDE1-212ENST00000529046 FBXO10Q9UK96 956 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 TMPRSS11EQ9UL52 423 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 DENND2AQ9ULE3 1009 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 MYRFQ9Y2G1 1151 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 PTPN22Q9Y2R2 807 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 SETBP1Q9Y6X0 1596 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 PRAG1Q86YV5 1406 aa6.42□□□□□ -1.38
CSDE1-212ENST00000529046 ATF3P18847 181 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 APEX1P27695 318 aaKnown RBP6.41□□□□□ -1.38
CSDE1-212ENST00000529046 ETV4P43268 484 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 RGS3P49796 1198 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 MANFP55145 182 aaKnown RBP6.41□□□□□ -1.38
CSDE1-212ENST00000529046 MTMR1Q13613 665 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 ZBTB41Q5SVQ8 909 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 SLFN12LQ6IEE8 588 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 KIAA1841Q6NSI8 718 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 LYSMD2Q8IV50 215 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 SLC41A1Q8IVJ1 513 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 BCL6BQ8N143 479 aaPredicted RBP6.41□□□□□ -1.38
CSDE1-212ENST00000529046 WDR48Q8TAF3 677 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 COG1Q8WTW3 980 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 LMBR1Q8WVP7 490 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 MSRAQ9UJ68 235 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 RPGRIP1LQ68CZ1 1315 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 PTPRUQ92729 1446 aa6.41□□□□□ -1.38
CSDE1-212ENST00000529046 AHDC1Q5TGY3 1603 aaPredicted RBP6.4□□□□□ -1.38
CSDE1-212ENST00000529046 LCHNA4D1U4 455 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 KDM1AO60341 852 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 PRPF6O94906 941 aaKnown RBP6.4□□□□□ -1.38
CSDE1-212ENST00000529046 HMGCRP04035 888 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 ADCY8P40145 1251 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 GUCY2FP51841 1108 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 BCAR1P56945 870 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 ANAPC15P60006 121 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 PUM1Q14671 1186 aaKnown RBP eCLIP6.4□□□□□ -1.384e-8■□□□□ 9.2
CSDE1-212ENST00000529046 ZMAT1Q5H9K5 638 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 ESPNLQ6ZVH7 1005 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 BRINP3Q76B58 766 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 C7orf31Q8N865 590 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 DNERQ8NFT8 737 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 PUS7Q96PZ0 661 aaKnown RBP6.4□□□□□ -1.38
CSDE1-212ENST00000529046 LMF1Q96S06 567 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 POFUT1Q9H488 388 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 DDX56Q9NY93 547 aaKnown RBP6.4□□□□□ -1.38
CSDE1-212ENST00000529046 MYO5BQ9ULV0 1848 aa6.4□□□□□ -1.38
CSDE1-212ENST00000529046 NAIPQ13075 1403 aa6.4□□□□□ -1.39
CSDE1-212ENST00000529046 SETD5Q9C0A6 1442 aa6.4□□□□□ -1.39
CSDE1-212ENST00000529046 A0A0A6YYJ9 748 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 TRIM75PA6NK02 468 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 PFKMP08237 780 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 KCNQ1P51787 676 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 RRADP55042 308 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 EVA1CP58658 441 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 CD83Q01151 205 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 EXOSC10Q01780 885 aaKnown RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 EIF4HQ15056 248 aaKnown RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 FSCN1Q16658 493 aaKnown RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 BRDTQ58F21 947 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 ZNF772Q68DY9 489 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 IQSEC1Q6DN90 963 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 UNQ6494/PRO21346Q6UXR6 183 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 OTOP2Q7RTS6 562 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 HDGFL2Q7Z4V5 671 aaPredicted RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 BMP8AQ7Z5Y6 402 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 ANKRD13AQ8IZ07 590 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 CNTD1Q8N815 330 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 LRRC59Q96AG4 307 aaKnown RBP6.39□□□□□ -1.39
CSDE1-212ENST00000529046 ACAP3Q96P50 834 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 LRRC37BQ96QE4 947 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 TUBGCP5Q96RT8 1024 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 MYL10Q9BUA6 226 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 ASPSCR1Q9BZE9 553 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 DEF6Q9H4E7 631 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 CD248Q9HCU0 757 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 HOMER2Q9NSB8 354 aa6.39□□□□□ -1.39
CSDE1-212ENST00000529046 PPP2R3BQ9Y5P8 575 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms