RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 WDR93Q6P2C0 686 aa16■□□□□ 0.15
ECHDC1-220ENST00000528402 MOB2Q70IA6 237 aa16■□□□□ 0.15
ECHDC1-220ENST00000528402 ABRAQ8N0Z2 381 aa16■□□□□ 0.15
ECHDC1-220ENST00000528402 GPRC5AQ8NFJ5 357 aa16■□□□□ 0.15
ECHDC1-220ENST00000528402 GPR88Q9GZN0 384 aa16■□□□□ 0.15
ECHDC1-220ENST00000528402 LRRC37A2A6NM11 1700 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 GRID2IPA4D2P6 1211 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 TISP43B9A030 160 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 DDX3XO00571 662 aaKnown RBP eCLIP15.99■□□□□ 0.157e-10■■■□□ 16
ECHDC1-220ENST00000528402 STRNO43815 780 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 ZRANB2O95218 330 aaKnown RBP eCLIP15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 ZSCAN20P17040 1043 aaPredicted RBP15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 TCF7P36402 384 aaPredicted RBP15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 CLDN10P78369 228 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 FSTL1Q12841 308 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 MXD4Q14582 209 aaPredicted RBP15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 TTLL4Q14679 1199 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 ENOX2Q16206 610 aaKnown RBP15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 GPR162Q16538 588 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 MEI1Q5TIA1 1274 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 GJB7Q6PEY0 223 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 CBWD2Q8IUF1 395 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 CREG2Q8IUH2 290 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 DHX37Q8IY37 1157 aaKnown RBP15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 MMGT1Q8N4V1 131 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 ANKRD13CQ8N6S4 541 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 FBXL13Q8NEE6 735 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 PCYT2Q99447 389 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 SYT11Q9BT88 431 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 ANKZF1Q9H8Y5 726 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 TXNRD2Q9NNW7 524 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 SALL4Q9UJQ4 1053 aa15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 AJAP1Q9UKB5 411 aaPredicted RBP15.99■□□□□ 0.15
ECHDC1-220ENST00000528402 GOLGA8IPA6NC78 632 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 GOLGA8JA6NMD2 632 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 FOXN3O00409 490 aaPredicted RBP15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 NOP56O00567 594 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 BUB1O43683 1085 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 PALMO75781 387 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 ADRB2P07550 413 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 TMEM253P0C7T8 217 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 GLRA2P23416 452 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 PSMD6Q15008 389 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 CFAP221Q4G0U5 840 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 CCDC181Q5TID7 509 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 CC2D1AQ6P1N0 951 aaPredicted RBP15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 SLC39A4Q6P5W5 647 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 ZPBP2Q6X784 338 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 ATP8B4Q8TF62 1192 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 U2AF1L4Q8WU68 220 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 PSPC1Q8WXF1 523 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 DHX38Q92620 1227 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 TAF4BQ92750 862 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 PBKQ96KB5 322 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 NT5C1BQ96P26 610 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 MMS19Q96T76 1030 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 GPR20Q99678 358 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 AGPAT1Q99943 283 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 KIFC3Q9BVG8 833 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 TLR10Q9BXR5 811 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 C2orf40Q9H1Z8 148 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 SMARCAD1Q9H4L7 1026 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 FAM53CQ9NYF3 392 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 DIS3Q9Y2L1 958 aaKnown RBP15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 SIP14410 1827 aa15.98■□□□□ 0.15
ECHDC1-220ENST00000528402 LRRIQ3A6PVS8 624 aaPredicted RBP15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 ASAP2O43150 1006 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 ADCY3O60266 1144 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 SRGAP2O75044 1071 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 GZMAP12544 262 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 NOP2P46087 812 aaKnown RBP15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 AP3M2P53677 418 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 TCEAL1Q15170 157 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 ARHGAP44Q17R89 818 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 MAP9Q49MG5 647 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 GLE1Q53GS7 698 aaKnown RBP15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 CCDC62Q6P9F0 684 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 TAS1R3Q7RTX0 852 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 ZNF467Q7Z7K2 595 aaPredicted RBP15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 ANKRD23Q86SG2 305 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 ADGRA3Q8IWK6 1321 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 FAM71AQ8IYT1 594 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 MSL3Q8N5Y2 521 aaKnown RBP15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 PLEKHO2Q8TD55 490 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 SCFD2Q8WU76 684 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 GLG1Q92896 1179 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 TMEM143Q96AN5 459 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 SAAL1Q96ER3 474 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 FGD4Q96M96 766 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 RAB20Q9NX57 234 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 CLEC11AQ9Y240 323 aa15.97■□□□□ 0.15
ECHDC1-220ENST00000528402 ANKRD62A6NC57 917 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 LRRIQ4A6NIV6 560 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 HBP1O60381 514 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 SOX10P56693 466 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 GCNT1Q02742 428 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 LAMC2Q13753 1193 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 RPS6KA1Q15418 735 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 SURF1Q15526 300 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 LY6KQ17RY6 165 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms