RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 SUSD6Q92537 303 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 PPP2R3CQ969Q6 453 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 CDCA3Q99618 268 aaPredicted RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 MRPL9Q9BYD2 267 aaKnown RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 NFKBIZQ9BYH8 718 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 CSRNP2Q9H175 543 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 POLR3FQ9H1D9 316 aaPredicted RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 ZSCAN16Q9H4T2 348 aaPredicted RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 MTMR6Q9Y217 621 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 USP20Q9Y2K6 914 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 USP15Q9Y4E8 981 aaPredicted RBP13.91□□□□□ -0.18
SMCO4-202ENST00000525141 IPPQ9Y573 584 aa13.91□□□□□ -0.18
SMCO4-202ENST00000525141 TRIOO75962 3097 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 A0A1B0GUA9 196 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 LOC730098B7Z3J9 87 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 INO80B-WBP1J3KQ70 363 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 INPPL1O15357 1258 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 USO1O60763 962 aaKnown RBP13.9□□□□□ -0.18
SMCO4-202ENST00000525141 ZC3H11AO75152 810 aaKnown RBP eCLIP13.9□□□□□ -0.18
SMCO4-202ENST00000525141 POMCP01189 267 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 ALDH2P05091 517 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 CYP11B2P19099 503 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 AXLP30530 894 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 ANKRD54Q6NXT1 300 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 KANK3Q6NY19 840 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 PADI6Q6TGC4 694 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 TAS1R1Q7RTX1 841 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 VPS52Q8N1B4 723 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 SLC22A17Q8WUG5 538 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 ZBP1Q9H171 429 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 CXCL16Q9H2A7 254 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 FZD8Q9H461 694 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 RSAD1Q9HA92 442 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 ENTPD7Q9NQZ7 604 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 CDH22Q9UJ99 828 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 FAM50BQ9Y247 325 aa13.9□□□□□ -0.18
SMCO4-202ENST00000525141 NRP1O14786 923 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 EDN1P05305 212 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 CTSAP10619 480 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 ITGA4P13612 1032 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 CDC25AP30304 524 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 PRPHP41219 470 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 TFDP1Q14186 410 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 PCBP1Q15365 356 aaKnown RBP eCLIP13.89□□□□□ -0.19
SMCO4-202ENST00000525141 LLGL2Q6P1M3 1020 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 RNF135Q8IUD6 432 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 COLGALT2Q8IYK4 626 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 IGSF22Q8N9C0 903 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 ZFP42Q96MM3 310 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 GAD1Q99259 594 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 MMTAG2Q9BU76 263 aaKnown RBP13.89□□□□□ -0.19
SMCO4-202ENST00000525141 APOL5Q9BWW9 433 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 GBP3Q9H0R5 595 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 IRAK3Q9Y616 596 aa13.89□□□□□ -0.19
SMCO4-202ENST00000525141 ARL5CA6NH57 179 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 PP2D1A8MPX8 630 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 F8W810 466 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 BMP15O95972 392 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 MUTP22033 750 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 AKAP5P24588 427 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 RNASELQ05823 741 aaKnown RBP13.88□□□□□ -0.19
SMCO4-202ENST00000525141 DSC1Q08554 894 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 RESTQ13127 1097 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 SMC1AQ14683 1233 aaKnown RBP13.88□□□□□ -0.19
SMCO4-202ENST00000525141 CBX2Q14781 532 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-202ENST00000525141 TMEM31Q5JXX7 168 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 CDCA2Q69YH5 1023 aaPredicted RBP13.88□□□□□ -0.19
SMCO4-202ENST00000525141 NOTUMQ6P988 496 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 SPRYD3Q8NCJ5 442 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 CNNM3Q8NE01 707 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 RSPH1Q8WYR4 309 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 TMEM169Q96HH4 297 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 MARCH5Q9NX47 278 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 KANSL3Q9P2N6 904 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 LRWD1Q9UFC0 647 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 KIAA1024Q9UPX6 916 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 FAN1Q9Y2M0 1017 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 HCFC2Q9Y5Z7 792 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 CNTNAP2Q9UHC6 1331 aa13.88□□□□□ -0.19
SMCO4-202ENST00000525141 MYO10Q9HD67 2058 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 E9PMD0 336 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 ERLIN2O94905 339 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 ALADP13716 330 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 CCT6AP40227 531 aaKnown RBP13.87□□□□□ -0.19
SMCO4-202ENST00000525141 ATP2C1P98194 919 aaPredicted RBP13.87□□□□□ -0.19
SMCO4-202ENST00000525141 FAM187BQ17R55 369 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 ARL6IP4Q66PJ3 421 aaKnown RBP13.87□□□□□ -0.19
SMCO4-202ENST00000525141 KCNK18Q7Z418 384 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 RNF168Q8IYW5 571 aaPredicted RBP13.87□□□□□ -0.19
SMCO4-202ENST00000525141 C12orf76Q8N812 135 aaPredicted RBP13.87□□□□□ -0.19
SMCO4-202ENST00000525141 CCDC51Q96ER9 411 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 TMEM175Q9BSA9 504 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 RAB34Q9BZG1 259 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 CCDC113Q9H0I3 377 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 NXF3Q9H4D5 531 aaKnown RBP13.87□□□□□ -0.19
SMCO4-202ENST00000525141 UBN1Q9NPG3 1134 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 STK24Q9Y6E0 443 aa13.87□□□□□ -0.19
SMCO4-202ENST00000525141 LRRIQ4A6NIV6 560 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 DCXO43602 365 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms