RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 TSHZ2Q9NRE2 1034 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 GJB4Q9NTQ9 266 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 PPP4R2Q9NY27 417 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 GIT1Q9Y2X7 761 aa13.17□□□□□ -0.3
SPARC-206ENST00000524277 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 C2CD4DB7Z1M9 353 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 INO80B-WBP1J3KQ70 363 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 TSPAN1O60635 241 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 URODP06132 367 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 EPCAMP16422 314 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 AVPR2P30518 371 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 CLCN4P51793 760 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 ORC2Q13416 577 aaPredicted RBP13.16□□□□□ -0.3
SPARC-206ENST00000524277 SAFBQ15424 915 aaKnown RBP eCLIP13.16□□□□□ -0.3
SPARC-206ENST00000524277 ME3Q16798 604 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 OTOP3Q7RTS5 596 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 GPR149Q86SP6 731 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 DIS3L2Q8IYB7 885 aaKnown RBP13.16□□□□□ -0.3
SPARC-206ENST00000524277 COLGALT2Q8IYK4 626 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 SMG8Q8ND04 991 aaKnown RBP13.16□□□□□ -0.3
SPARC-206ENST00000524277 NSUN7Q8NE18 718 aaKnown RBP13.16□□□□□ -0.3
SPARC-206ENST00000524277 CMASQ8NFW8 434 aaPredicted RBP13.16□□□□□ -0.3
SPARC-206ENST00000524277 HDAC7Q8WUI4 952 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 BCL7CQ8WUZ0 217 aaPredicted RBP13.16□□□□□ -0.3
SPARC-206ENST00000524277 AUTS2Q8WXX7 1259 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 PRIMPOLQ96LW4 560 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 MTMR9Q96QG7 549 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 HERC2P3Q9BVR0 1158 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 COLEC11Q9BWP8 271 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
SPARC-206ENST00000524277 XPNPEP1Q9NQW7 623 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 IPPQ9Y573 584 aa13.16□□□□□ -0.3
SPARC-206ENST00000524277 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 ZBTB39O15060 712 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 POMCP01189 267 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 ADH1AP07327 375 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 CNPP09543 421 aaKnown RBP13.15□□□□□ -0.3
SPARC-206ENST00000524277 TXKP42681 527 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 RARRES1P49788 294 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 NEK4P51957 841 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 MBTD1Q05BQ5 628 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 DSC1Q08554 894 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 C12orf76Q8N812 135 aaPredicted RBP13.15□□□□□ -0.3
SPARC-206ENST00000524277 NECAB1Q8N987 351 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 MCPH1Q8NEM0 835 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 PRSS33Q8NF86 280 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 RPS6KC1Q96S38 1066 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 VN1R3Q9BXE9 311 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
SPARC-206ENST00000524277 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.15□□□□□ -0.3
SPARC-206ENST00000524277 BMP2KQ9NSY1 1161 aaPredicted RBP13.15□□□□□ -0.3
SPARC-206ENST00000524277 CACNA1HO95180 2353 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 A0A1B0GUA9 196 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 MUTP22033 750 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 OR1G1P47890 313 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 CREMQ03060 361 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 CAPSQ13938 189 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 IER5LQ5T953 404 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 SLC27A1Q6PCB7 646 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 TMC5Q6UXY8 1006 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 CCDC149Q6ZUS6 474 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 RNF168Q8IYW5 571 aaPredicted RBP13.14□□□□□ -0.31
SPARC-206ENST00000524277 ERMNQ8TAM6 284 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 STAMQ92783 540 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 NACC1Q96RE7 527 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 GAD1Q99259 594 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 EIF2AQ9BY44 585 aaKnown RBP13.14□□□□□ -0.31
SPARC-206ENST00000524277 RXFP1Q9HBX9 757 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 PRMT7Q9NVM4 692 aaPredicted RBP13.14□□□□□ -0.31
SPARC-206ENST00000524277 LIMD1Q9UGP4 676 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 WDFY4Q6ZS81 3184 aa13.14□□□□□ -0.31
SPARC-206ENST00000524277 FAM205CA6NFA0 338 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 B4GALT3O60512 393 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 EFEMP2O95967 443 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 ARF4P18085 180 aaPredicted RBP13.13□□□□□ -0.31
SPARC-206ENST00000524277 GLRA2P23416 452 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 SP100P23497 879 aaPredicted RBP13.13□□□□□ -0.31
SPARC-206ENST00000524277 GLUD2P49448 558 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 AFF1P51825 1210 aaKnown RBP13.13□□□□□ -0.31
SPARC-206ENST00000524277 DSG1Q02413 1049 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 GRIK3Q13003 919 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 AMHR2Q16671 573 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 FAM187BQ17R55 369 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 KIAA0319Q5VV43 1072 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 ZBTB8OSQ8IWT0 167 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 ASAP3Q8TDY4 903 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 LLPHQ9BRT6 129 aaKnown RBP13.13□□□□□ -0.31
SPARC-206ENST00000524277 POLR3CQ9BUI4 534 aaPredicted RBP13.13□□□□□ -0.31
SPARC-206ENST00000524277 C2orf40Q9H1Z8 148 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 PLEKHA4Q9H4M7 779 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 FNIP2Q9P278 1114 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 IGSF9Q9P2J2 1179 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 PRG3Q9Y2Y8 225 aaPredicted RBP13.13□□□□□ -0.31
SPARC-206ENST00000524277 STK24Q9Y6E0 443 aa13.13□□□□□ -0.31
SPARC-206ENST00000524277 PAPLNO95428 1278 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 BRD1O95696 1058 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 GLUD1P00367 558 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms