RNA–Protein interactions for RNA: ENST00000523742.1

LINC01947-201, Transcript of long intergenic non-protein coding RNA 1947, humanhuman

TSL 4 BASIC

Gene LINC01947, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01947-201ENST00000523742 RNF41Q9H4P4 317 aaPredicted RBP6.52□□□□□ -1.37
LINC01947-201ENST00000523742 VTA1Q9NP79 307 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 CACNA2D2Q9NY47 1150 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 MBD1Q9UIS9 605 aaPredicted RBP6.52□□□□□ -1.37
LINC01947-201ENST00000523742 CCPG1Q9ULG6 757 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 MTMR7Q9Y216 660 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 Q9Y3F1 56 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 BAZ2AQ9UIF9 1905 aaKnown RBP6.52□□□□□ -1.37
LINC01947-201ENST00000523742 SMCHD1A6NHR9 2005 aa6.52□□□□□ -1.37
LINC01947-201ENST00000523742 LAMA2P24043 3122 aaKnown RBP6.52□□□□□ -1.37
LINC01947-201ENST00000523742 RAD50Q92878 1312 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 ZNFX1Q9P2E3 1918 aaKnown RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 ZC3H12DA2A288 527 aaKnown RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 MATN3O15232 486 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 FSHBP01225 129 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 FGBP02675 491 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 ICAM1P05362 532 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 TOP1P11387 765 aaKnown RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 CPT1AP50416 773 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 CDK7P50613 346 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 RAB30Q15771 203 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 FSCN1Q16658 493 aaKnown RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 MCMDC2Q4G0Z9 681 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 RRP12Q5JTH9 1297 aaKnown RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 MFSD6Q6ZSS7 791 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 SULF2Q8IWU5 870 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 FAM133AQ8N9E0 248 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 TIFAQ96CG3 184 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 SIGLEC10Q96LC7 697 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 TTC14Q96N46 770 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 SEC62Q99442 399 aaKnown RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 UPF3AQ9H1J1 476 aaKnown RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 A1CFQ9NQ94 594 aaKnown RBP6.51□□□□□ -1.37
LINC01947-201ENST00000523742 ANAPC4Q9UJX5 808 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 IRAK3Q9Y616 596 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 PLIN4Q96Q06 1357 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 UNC80Q8N2C7 3258 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 VCANP13611 3396 aa6.51□□□□□ -1.37
LINC01947-201ENST00000523742 PTPDC1A2A3K4 754 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 HIP1O00291 1037 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 NKRFO15226 690 aaKnown RBP eCLIP6.5□□□□□ -1.37
LINC01947-201ENST00000523742 ORC4O43929 436 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 KPNA6O60684 536 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 PFKMP08237 780 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 ZGLP1P0C6A0 271 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 ACTN1P12814 892 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 BEX3Q00994 111 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 CNTN2Q02246 1040 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 ZNF252P-AS1Q0IIN9 211 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 ITGA7Q13683 1181 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 ALX1Q15699 326 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 SYDE2Q5VT97 1194 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 CCSAPQ6IQ19 270 aaPredicted RBP6.5□□□□□ -1.37
LINC01947-201ENST00000523742 CXCL17Q6UXB2 119 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 TLK2Q86UE8 772 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 IQCA1Q86XH1 822 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 RETREG2Q8NC44 543 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 ESR2Q92731 530 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 RILPL2Q969X0 211 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 CHMP4CQ96CF2 233 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 SORCS2Q96PQ0 1159 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 MIPEPQ99797 713 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.5□□□□□ -1.37
LINC01947-201ENST00000523742 MENTQ9BUN1 341 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 MAF1Q9H063 256 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 HIPK3Q9H422 1215 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 RWDD1Q9H446 243 aaPredicted RBP6.5□□□□□ -1.37
LINC01947-201ENST00000523742 FBRSQ9HAH7 460 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 SLC28A3Q9HAS3 691 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 IL23AQ9NPF7 189 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 TCP11L1Q9NUJ3 509 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 CYP39A1Q9NYL5 469 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 TBX21Q9UL17 535 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 MYO9BQ13459 2157 aa6.5□□□□□ -1.37
LINC01947-201ENST00000523742 CDH23Q9H251 3354 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 MYH7P12883 1935 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 RLFQ13129 1914 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 MYADML2A6NDP7 307 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 KIF28PB7ZC32 967 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 ZNF213O14771 459 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 LRIG2O94898 1065 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 ATG7O95352 703 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 FGAP02671 866 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 CSF2RAP15509 400 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 ITGB8P26012 769 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 CALML3P27482 149 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 ARNTP27540 789 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 PDE1AP54750 535 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 RRP1P56182 461 aaKnown RBP6.49□□□□□ -1.37
LINC01947-201ENST00000523742 NKX3-2P78367 333 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 TRAF1Q13077 416 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 BAATQ14032 418 aaPredicted RBP6.49□□□□□ -1.37
LINC01947-201ENST00000523742 DUSP28Q4G0W2 176 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 FAM47CQ5HY64 1035 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 TMEM240Q5SV17 173 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 GPATCH4Q5T3I0 446 aaKnown RBP6.49□□□□□ -1.37
LINC01947-201ENST00000523742 BTNL9Q6UXG8 535 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 RNF207Q6ZRF8 634 aa6.49□□□□□ -1.37
LINC01947-201ENST00000523742 ZNF365Q70YC5 407 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms