RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 EPC2Q52LR7 807 aa22.6■■□□□ 1.21
SQLE-206ENST00000523430 RHPN2Q8IUC4 686 aa22.6■■□□□ 1.21
SQLE-206ENST00000523430 RNF149Q8NC42 400 aa22.6■■□□□ 1.21
SQLE-206ENST00000523430 USP6NLQ92738 828 aa22.6■■□□□ 1.21
SQLE-206ENST00000523430 ZNF668Q96K58 619 aaPredicted RBP22.6■■□□□ 1.21
SQLE-206ENST00000523430 ZBTB45Q96K62 511 aaPredicted RBP22.6■■□□□ 1.21
SQLE-206ENST00000523430 MFSD14AQ96MC6 490 aa22.6■■□□□ 1.21
SQLE-206ENST00000523430 POP1Q99575 1024 aaKnown RBP22.6■■□□□ 1.21
SQLE-206ENST00000523430 TMEM117Q9H0C3 514 aa22.6■■□□□ 1.21
SQLE-206ENST00000523430 ZFYVE28Q9HCC9 887 aa22.6■■□□□ 1.21
SQLE-206ENST00000523430 KIF3CO14782 793 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 HOXC6P09630 235 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 MXD4Q14582 209 aaPredicted RBP22.59■■□□□ 1.21
SQLE-206ENST00000523430 SPA17Q15506 151 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 EXOC8Q8IYI6 725 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 METTL13Q8N6R0 699 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 PARD3BQ8TEW8 1205 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 JAKMIP2Q96AA8 810 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 LENG1Q96BZ8 264 aaPredicted RBP22.59■■□□□ 1.21
SQLE-206ENST00000523430 JPH2Q9BR39 696 aaPredicted RBP22.59■■□□□ 1.21
SQLE-206ENST00000523430 LACRTQ9GZZ8 138 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 APEX2Q9UBZ4 518 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 MYO6Q9UM54 1294 aa22.59■■□□□ 1.21
SQLE-206ENST00000523430 EXTL3O43909 919 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 CASQ1P31415 396 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 NLRP11P59045 1033 aaKnown RBP22.58■■□□□ 1.21
SQLE-206ENST00000523430 KLHL30Q0D2K2 578 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 IQSEC1Q6DN90 963 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 EFCAB12Q6NXP0 572 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 IRF2BP2Q7Z5L9 587 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 CCDC102AQ96A19 550 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 NLRP4Q96MN2 994 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 DNAJC12Q9UKB3 198 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 GUCA1BQ9UMX6 200 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 DOCK3Q8IZD9 2030 aa22.58■■□□□ 1.21
SQLE-206ENST00000523430 F8VZ95 297 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 P4HA2O15460 535 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 HOXD8P13378 290 aaPredicted RBP22.58■■□□□ 1.2
SQLE-206ENST00000523430 CYP2B6P20813 491 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 CYP2C19P33261 490 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 VAV2P52735 878 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 MAP2K1Q02750 393 aaPredicted RBP22.58■■□□□ 1.2
SQLE-206ENST00000523430 TNFAIP2Q03169 654 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 ZNF484Q5JVG2 852 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 ZNF569Q5MCW4 686 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 ZBTB41Q5SVQ8 909 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 CCDC122Q5T0U0 273 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 PHLDB3Q6NSJ2 640 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 EHBP1Q8NDI1 1231 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 IFIH1Q9BYX4 1025 aaKnown RBP22.58■■□□□ 1.2
SQLE-206ENST00000523430 GPR88Q9GZN0 384 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 HAUS4Q9H6D7 363 aa22.58■■□□□ 1.2
SQLE-206ENST00000523430 AGO2Q9UKV8 859 aaKnown RBP22.58■■□□□ 1.2
SQLE-206ENST00000523430 ZSWIM8A7E2V4 1837 aa22.57■■□□□ 1.2
SQLE-206ENST00000523430 MSCO60682 206 aa22.57■■□□□ 1.2
SQLE-206ENST00000523430 PPFIA4O75335 1185 aa22.57■■□□□ 1.2
SQLE-206ENST00000523430 CTGFP29279 349 aa22.57■■□□□ 1.2
SQLE-206ENST00000523430 WNT7BP56706 349 aa22.57■■□□□ 1.2
SQLE-206ENST00000523430 TMC2Q8TDI7 906 aa22.57■■□□□ 1.2
SQLE-206ENST00000523430 FAM84AQ96KN4 292 aa22.57■■□□□ 1.2
SQLE-206ENST00000523430 ZNF215Q9UL58 517 aaPredicted RBP22.57■■□□□ 1.2
SQLE-206ENST00000523430 PCDHA13Q9Y5I0 950 aa22.57■■□□□ 1.2
SQLE-206ENST00000523430 H3BRB1 525 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 ZNF865P0CJ78 1059 aaPredicted RBP22.56■■□□□ 1.2
SQLE-206ENST00000523430 DLATP10515 647 aaKnown RBP22.56■■□□□ 1.2
SQLE-206ENST00000523430 GTF2F1P35269 517 aaKnown RBP eCLIP22.56■■□□□ 1.23e-10■■■■■ 45.1
SQLE-206ENST00000523430 ACOT2P49753 483 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 EFNA5P52803 228 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 PTK2Q05397 1052 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 ZNF662Q6ZS27 426 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 ARHGEF19Q8IW93 802 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 ZBTB8OSQ8IWT0 167 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 SLC35F6Q8N357 371 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 SMC1BQ8NDV3 1235 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 MSTO1Q9BUK6 570 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 TUT1Q9H6E5 874 aaKnown RBP22.56■■□□□ 1.2
SQLE-206ENST00000523430 L2HGDHQ9H9P8 463 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 PCNTO95613 3336 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 ZNF233A6NK53 670 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 RBAK-RBAKDNI3L0D1 243 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 TNPO2O14787 897 aaKnown RBP22.56■■□□□ 1.2
SQLE-206ENST00000523430 PRKCBP05771 671 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 HARSP12081 509 aaKnown RBP22.56■■□□□ 1.2
SQLE-206ENST00000523430 RGS2P41220 211 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 MATR3P43243 847 aaKnown RBP eCLIP22.56■■□□□ 1.28e-7■■■■■ 27.3
SQLE-206ENST00000523430 CETN1Q12798 172 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 OLFML2BQ68BL8 750 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 CRELD2Q6UXH1 353 aaPredicted RBP22.56■■□□□ 1.2
SQLE-206ENST00000523430 PAXIP1Q6ZW49 1069 aaPredicted RBP22.56■■□□□ 1.2
SQLE-206ENST00000523430 APBA2Q99767 749 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 TMEM8AQ9HCN3 771 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.56■■□□□ 1.23e-8■■■■■ 56
SQLE-206ENST00000523430 GJD2Q9UKL4 321 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 GNEQ9Y223 722 aaKnown RBP22.56■■□□□ 1.2
SQLE-206ENST00000523430 DUSP10Q9Y6W6 482 aa22.56■■□□□ 1.2
SQLE-206ENST00000523430 A0A0B4J269 797 aa22.55■■□□□ 1.2
SQLE-206ENST00000523430 PMM2O15305 246 aa22.55■■□□□ 1.2
SQLE-206ENST00000523430 GFPT2O94808 682 aa22.55■■□□□ 1.2
SQLE-206ENST00000523430 KLRC1P26715 233 aa22.55■■□□□ 1.2
SQLE-206ENST00000523430 DRAP1Q14919 205 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms