RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZBTB39O15060 712 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 INPPL1O15357 1258 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 NCLP19338 710 aaKnown RBP28.93■■■□□ 2.22
PVT1-219ENST00000523427 YWHABP31946 246 aaKnown RBP28.93■■■□□ 2.22
PVT1-219ENST00000523427 MLH1P40692 756 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 RFC5P40937 340 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 EMC2Q15006 297 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 NCAPH2Q6IBW4 605 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 GALNT17Q6IS24 598 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 CPLX2Q6PUV4 134 aaKnown RBP28.93■■■□□ 2.22
PVT1-219ENST00000523427 PALB2Q86YC2 1186 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 EXOC8Q8IYI6 725 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 CCDC105Q8IYK2 499 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 DTWD2Q8NBA8 298 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 CPB2Q96IY4 423 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 RTP3Q9BQQ7 232 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 LXNQ9BS40 222 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 IGSF9Q9P2J2 1179 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 IPPQ9Y573 584 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 DENND4AQ7Z401 1863 aa28.93■■■□□ 2.22
PVT1-219ENST00000523427 CCNT1O60563 726 aaKnown RBP28.92■■■□□ 2.22
PVT1-219ENST00000523427 GLUD1P00367 558 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 GLUD2P49448 558 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 CYP4A11Q02928 519 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 CTTNQ14247 550 aaKnown RBP28.92■■■□□ 2.22
PVT1-219ENST00000523427 FERMT3Q86UX7 667 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 GLYCTKQ8IVS8 523 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 COLGALT2Q8IYK4 626 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 ST13P5Q8NFI4 369 aaPredicted RBP28.92■■■□□ 2.22
PVT1-219ENST00000523427 TCP11Q8WWU5 503 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 B3GALT6Q96L58 329 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 FAM20AQ96MK3 541 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 PIDD1Q9HB75 910 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 MIOSQ9NXC5 875 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 CA14Q9ULX7 337 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 CYP46A1Q9Y6A2 500 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 C2orf16Q68DN1 1984 aa28.92■■■□□ 2.22
PVT1-219ENST00000523427 ARL5CA6NH57 179 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 REC8O95072 547 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 SCNN1GP51170 649 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 OTUD6AQ7L8S5 288 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 NEK8Q86SG6 692 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 CNNM3Q8NE01 707 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 SMG7Q92540 1137 aaKnown RBP28.91■■■□□ 2.22
PVT1-219ENST00000523427 DYDC2Q96IM9 177 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 ZFP42Q96MM3 310 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 ZSWIM6Q9HCJ5 1215 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 KCNMB3Q9NPA1 279 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 UBN1Q9NPG3 1134 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 SSX2IPQ9Y2D8 614 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 VPS13AQ96RL7 3174 aa28.91■■■□□ 2.22
PVT1-219ENST00000523427 EPHA7Q15375 998 aa28.9■■■□□ 2.22
PVT1-219ENST00000523427 ELMSAN1Q6PJG2 1045 aa28.9■■■□□ 2.22
PVT1-219ENST00000523427 CMASQ8NFW8 434 aaPredicted RBP28.9■■■□□ 2.22
PVT1-219ENST00000523427 KCNG4Q8TDN1 519 aa28.9■■■□□ 2.22
PVT1-219ENST00000523427 STAMQ92783 540 aa28.9■■■□□ 2.22
PVT1-219ENST00000523427 ZNF274Q96GC6 653 aaPredicted RBP28.9■■■□□ 2.22
PVT1-219ENST00000523427 MYADMQ96S97 322 aa28.9■■■□□ 2.22
PVT1-219ENST00000523427 MTRQ99707 1265 aa28.9■■■□□ 2.22
PVT1-219ENST00000523427 WDR6Q9NNW5 1121 aaKnown RBP28.9■■■□□ 2.22
PVT1-219ENST00000523427 GJB4Q9NTQ9 266 aa28.9■■■□□ 2.22
PVT1-219ENST00000523427 INO80B-WBP1J3KQ70 363 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 ASAP2O43150 1006 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 TSPAN1O60635 241 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 KIAA0319Q5VV43 1072 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 PIK3AP1Q6ZUJ8 805 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 TPH2Q8IWU9 490 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 C4orf19Q8IY42 314 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 RABGGTAQ92696 567 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 PPME1Q9Y570 386 aa28.89■■■□□ 2.22
PVT1-219ENST00000523427 CLUHO75153 1309 aa28.89■■■□□ 2.21
PVT1-219ENST00000523427 KRBA1A5PL33 1030 aa28.88■■■□□ 2.21
PVT1-219ENST00000523427 NR1I2O75469 434 aa28.88■■■□□ 2.21
PVT1-219ENST00000523427 NCBP1Q09161 790 aaKnown RBP28.88■■■□□ 2.21
PVT1-219ENST00000523427 NOTUMQ6P988 496 aa28.88■■■□□ 2.21
PVT1-219ENST00000523427 POTEDQ86YR6 584 aa28.88■■■□□ 2.21
PVT1-219ENST00000523427 HAS1Q92839 578 aa28.88■■■□□ 2.21
PVT1-219ENST00000523427 TRIM6Q9C030 488 aaPredicted RBP28.88■■■□□ 2.21
PVT1-219ENST00000523427 DPP7Q9UHL4 492 aa28.88■■■□□ 2.21
PVT1-219ENST00000523427 GVINP1Q7Z2Y8 2422 aa28.88■■■□□ 2.21
PVT1-219ENST00000523427 GAS2O43903 313 aaKnown RBP28.87■■■□□ 2.21
PVT1-219ENST00000523427 FOXK2Q01167 660 aa28.87■■■□□ 2.21
PVT1-219ENST00000523427 SPECC1Q5M775 1068 aa28.87■■■□□ 2.21
PVT1-219ENST00000523427 CDR2LQ86X02 465 aaPredicted RBP28.87■■■□□ 2.21
PVT1-219ENST00000523427 SLC44A3Q8N4M1 653 aa28.87■■■□□ 2.21
PVT1-219ENST00000523427 OXER1Q8TDS5 423 aa28.87■■■□□ 2.21
PVT1-219ENST00000523427 RIN2Q8WYP3 895 aaPredicted RBP28.87■■■□□ 2.21
PVT1-219ENST00000523427 COLEC11Q9BWP8 271 aa28.87■■■□□ 2.21
PVT1-219ENST00000523427 ZSWIM4Q9H7M6 989 aa28.87■■■□□ 2.21
PVT1-219ENST00000523427 WNT16Q9UBV4 365 aa28.87■■■□□ 2.21
PVT1-219ENST00000523427 DMDP11532 3685 aa28.87■■■□□ 2.21
PVT1-219ENST00000523427 GCFC2P16383 781 aaKnown RBP28.86■■■□□ 2.21
PVT1-219ENST00000523427 AKAP5P24588 427 aa28.86■■■□□ 2.21
PVT1-219ENST00000523427 PTENP60484 403 aa28.86■■■□□ 2.21
PVT1-219ENST00000523427 DSG1Q02413 1049 aa28.86■■■□□ 2.21
PVT1-219ENST00000523427 PPP4R3AQ6IN85 833 aa28.86■■■□□ 2.21
PVT1-219ENST00000523427 GET4Q7L5D6 327 aaPredicted RBP28.86■■■□□ 2.21
PVT1-219ENST00000523427 PHF20Q9BVI0 1012 aa28.86■■■□□ 2.21
PVT1-219ENST00000523427 CSRNP2Q9H175 543 aa28.86■■■□□ 2.21
PVT1-219ENST00000523427 RXFP1Q9HBX9 757 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms