RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 TRIM27P14373 513 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 FSTP19883 344 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 LTBRP36941 435 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 OAZ1P54368 228 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 VCPP55072 806 aaKnown RBP7.52□□□□□ -1.21
VPS13B-211ENST00000522802 BFSP2Q13515 415 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 DUSP28Q4G0W2 176 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 TIGD5Q53EQ6 642 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 MUM1L1Q5H9M0 696 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 ARTNQ5T4W7 220 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 IQSEC1Q6DN90 963 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 NFRKBQ6P4R8 1299 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 CNKSR3Q6P9H4 555 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 LRRC8DQ7L1W4 858 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 RASGRP2Q7LDG7 609 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 UBE3DQ7Z6J8 389 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 SLITRK4Q8IW52 837 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 LRRC47Q8N1G4 583 aaKnown RBP7.52□□□□□ -1.21
VPS13B-211ENST00000522802 KCT2Q8NC54 265 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 GATA6Q92908 595 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 PABPC5Q96DU9 382 aaKnown RBP7.52□□□□□ -1.21
VPS13B-211ENST00000522802 RAD9AQ99638 391 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 MTG1Q9BT17 334 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-211ENST00000522802 ZFP64Q9NPA5 681 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 POLR3KQ9Y2Y1 108 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-211ENST00000522802 Q9Y3F1 56 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 CTDP1Q9Y5B0 961 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-211ENST00000522802 ZNF292O60281 2723 aa7.52□□□□□ -1.21
VPS13B-211ENST00000522802 PTPRZ1P23471 2315 aaPredicted RBP7.52□□□□□ -1.21
VPS13B-211ENST00000522802 GSC2O15499 205 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 TBX10O75333 385 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 IGLV1-40P01703 118 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 ERCC5P28715 1186 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-211ENST00000522802 CPT1AP50416 773 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 RARSP54136 660 aaKnown RBP7.51□□□□□ -1.21
VPS13B-211ENST00000522802 CHMP4BP1P59074 171 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 SNAP25P60880 206 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 ETF1P62495 437 aaKnown RBP7.51□□□□□ -1.21
VPS13B-211ENST00000522802 DLX2Q07687 328 aaPredicted RBP7.51□□□□□ -1.21
VPS13B-211ENST00000522802 APOBRQ0VD83 1088 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 SMAD2Q15796 467 aaKnown RBP7.51□□□□□ -1.21
VPS13B-211ENST00000522802 CTR9Q6PD62 1173 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.51□□□□□ -1.21
VPS13B-211ENST00000522802 ASCL5Q7RTU5 278 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 RPAINQ86UA6 219 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 AACSQ86V21 672 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 STK11IPQ8N1F8 1099 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 OR6J1Q8NGC5 347 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 AFAP1L1Q8TED9 768 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 EDAQ92838 391 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 CHMP4CQ96CF2 233 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 CRBNQ96SW2 442 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 DNAJC2Q99543 621 aaKnown RBP7.51□□□□□ -1.21
VPS13B-211ENST00000522802 FBRSQ9HAH7 460 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 SSU72Q9NP77 194 aaKnown RBP7.51□□□□□ -1.21
VPS13B-211ENST00000522802 VTA1Q9NP79 307 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 CLDND1Q9NY35 253 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 CYP39A1Q9NYL5 469 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 ADAM30Q9UKF2 790 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 CORINQ9Y5Q5 1042 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 NCOR2Q9Y618 2525 aa7.51□□□□□ -1.21
VPS13B-211ENST00000522802 KIAA1671Q9BY89 1806 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 CFAP47Q6ZTR5 3102 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 IGKV6D-41A0A0C4DH26 115 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 CXCL10P02778 98 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 ALAS1P13196 640 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 ADMP35318 185 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 PDE4BQ07343 736 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 PAK2Q13177 524 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 SLBPQ14493 270 aaKnown RBP eCLIP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 TTF1Q15361 905 aaPredicted RBP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 PTGISQ16647 500 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 PTPROQ16827 1216 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 LRRFIP1Q32MZ4 808 aaKnown RBP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 EPC2Q52LR7 807 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 PRSS36Q5K4E3 855 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 BMP8AQ7Z5Y6 402 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 ZAR1Q86SH2 424 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 HID1Q8IV36 788 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 SUGP1Q8IWZ8 645 aaKnown RBP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 TRMT2AQ8IZ69 625 aaKnown RBP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 MORC4Q8TE76 937 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 COPS5Q92905 334 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 NKD1Q969G9 470 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 WDR11Q9BZH6 1224 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 UPF3BQ9BZI7 483 aaKnown RBP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 ACBD3Q9H3P7 528 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 NSUN3Q9H649 340 aaKnown RBP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 BRMS1Q9HCU9 246 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 ATP8A2Q9NTI2 1148 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 NYAP2Q9P242 653 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 CLIP2Q9UDT6 1046 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 FEM1BQ9UK73 627 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 ISY1Q9ULR0 285 aaKnown RBP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 FAM50BQ9Y247 325 aa7.5□□□□□ -1.21
VPS13B-211ENST00000522802 NOP58Q9Y2X3 529 aaKnown RBP7.5□□□□□ -1.21
VPS13B-211ENST00000522802 ABHD14A-ACY1A0A1B0GW23 586 aa7.49□□□□□ -1.21
VPS13B-211ENST00000522802 LINC01565O15544 149 aa7.49□□□□□ -1.21
VPS13B-211ENST00000522802 MBTPS2O43462 519 aa7.49□□□□□ -1.21
VPS13B-211ENST00000522802 CSPG5O95196 566 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms