RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PDZD8Q8NEN9 1154 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 ERAP1Q9NZ08 941 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 RGL1Q9NZL6 768 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 BFARQ9NZS9 450 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 RRN3P2A6NIE6 340 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 HSD17B4P51659 736 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 YWHAHQ04917 246 aaPredicted RBP17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 GNASQ5JWF2 1037 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 APPL2Q8NEU8 664 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 CCSER1Q9C0I3 900 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 MTFR1LQ9H019 292 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 SIK2Q9H0K1 926 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 OPHN1O60890 802 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 CASP1P29466 404 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 LIG3P49916 1009 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 CAV1Q03135 178 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 NME3Q13232 169 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 EMBQ6PCB8 327 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 CDKL3Q8IVW4 592 aaPredicted RBP17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 TMEM39BQ9GZU3 492 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 ORC6Q9Y5N6 252 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 CDC42BPAQ5VT25 1732 aa17.28■□□□□ 0.36
PCDHA3-201ENST00000522353 GPR75-ASB3A0A0A6YYF3 556 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 PP2D1A8MPX8 630 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 CD4P01730 458 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 CPT1AP50416 773 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 ZKSCAN8Q15776 578 aaPredicted RBP17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 SCYL3Q8IZE3 742 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 SUN2Q9UH99 717 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 ARHGEF40Q8TER5 1519 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 SMARCA1P28370 1054 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 GRIK1P39086 918 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 ZNF235Q14590 738 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 DGKDQ16760 1214 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 GLE1Q53GS7 698 aaKnown RBP17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 EPAS1Q99814 870 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 AGAP1Q9UPQ3 857 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 HBP1O60381 514 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 OCRLQ01968 901 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 ADCY2Q08462 1091 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 LAMC2Q13753 1193 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 KCNB1Q14721 858 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 C6orf118Q5T5N4 469 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 PRAMEF18Q5VWM3 479 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 NUP85Q9BW27 656 aa17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 DHX35Q9H5Z1 703 aaKnown RBP17.27■□□□□ 0.36
PCDHA3-201ENST00000522353 CYP2C9P11712 490 aa17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 PLS3P13797 630 aa17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 SLCO1A2P46721 670 aa17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 RHOT1Q8IXI2 618 aa17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 FMR1NBQ8N0W7 255 aaPredicted RBP17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 EXT2Q93063 718 aa17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 RIT2Q99578 217 aa17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 HEMGNQ9BXL5 484 aa17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 SEC31AO94979 1220 aaKnown RBP17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 SAYSD1Q9NPB0 183 aa17.27■□□□□ 0.35
PCDHA3-201ENST00000522353 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 PALMO75781 387 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 TRIM49P0CI25 452 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 TRIM49CP0CI26 452 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 RASA1P20936 1047 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 SESN3P58005 492 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 KCTD17Q8N5Z5 321 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 PPWD1Q96BP3 646 aaKnown RBP17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 ABHD10Q9NUJ1 306 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 IQSEC2Q5JU85 1478 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 LUC7L3O95232 432 aaKnown RBP17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 FTLP02792 175 aaPredicted RBP17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 TGFB2P61812 414 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 IL1RL1Q01638 556 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 IFT88Q13099 833 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 TMEM132DQ14C87 1099 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 PARD6BQ9BYG5 372 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 ITGA4P13612 1032 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 ST8SIA6P61647 398 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 NNTQ13423 1086 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 SNX17Q15036 470 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 TMEM143Q96AN5 459 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 SNX9Q9Y5X1 595 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 UNC13BO14795 1591 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 PDHBP11177 359 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 RGS2P41220 211 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 ANKRD20A4Q4UJ75 823 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 ANKRD20A8PQ5CZ79 823 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 ANKRD20A2Q5SQ80 823 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 ANKRD20A1Q5TYW2 823 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 RNF25Q96BH1 459 aaPredicted RBP17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 BPIFA3Q9BQP9 254 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 PARVAQ9NVD7 372 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 ZNF212Q9UDV6 495 aa17.26■□□□□ 0.35
PCDHA3-201ENST00000522353 TMCC1O94876 653 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 PRAMEP78395 509 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 SNCBQ16143 134 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 TTC19Q6DKK2 380 aaPredicted RBP17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 TTC8Q8TAM2 541 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 ZC3H15Q8WU90 426 aaKnown RBP17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 ULK4Q96C45 1275 aa17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 ADARB2Q9NS39 739 aaKnown RBP17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 PRMT7Q9NVM4 692 aaPredicted RBP17.25■□□□□ 0.35
PCDHA3-201ENST00000522353 ANO9A1A5B4 782 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms