RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 GJA8P48165 433 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 LIG4P49917 911 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 ADAM9Q13443 819 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 KCNJ12Q14500 433 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 PTGISQ16647 500 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 TCP11X2Q5H9J9 407 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 ARMCX5Q6P1M9 558 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 SLC39A4Q6P5W5 647 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 CTAGE1Q96RT6 745 aa14.29□□□□□ -0.12
CPNE3-205ENST00000522240 INO80BQ9C086 356 aaPredicted RBP14.29□□□□□ -0.12
CPNE3-205ENST00000522240 LIMA1Q9UHB6 759 aaKnown RBP14.29□□□□□ -0.12
CPNE3-205ENST00000522240 M0QZ92 97 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 MAPK13O15264 365 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 CBFA2T2O43439 604 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 MYCP01106 439 aaPredicted RBP14.28□□□□□ -0.12
CPNE3-205ENST00000522240 EDN1P05305 212 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 EPB41P11171 864 aaKnown RBP14.28□□□□□ -0.12
CPNE3-205ENST00000522240 DARSP14868 501 aaKnown RBP14.28□□□□□ -0.12
CPNE3-205ENST00000522240 CDK11BP21127 795 aaKnown RBP14.28□□□□□ -0.12
CPNE3-205ENST00000522240 MRPS6P82932 125 aaKnown RBP14.28□□□□□ -0.12
CPNE3-205ENST00000522240 FANCCQ00597 558 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 RBL2Q08999 1139 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 AMHR2Q16671 573 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 KIZQ2M2Z5 673 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 MROH7Q68CQ1 1323 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 SLFN12LQ6IEE8 588 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 ANP32BQ92688 251 aaKnown RBP14.28□□□□□ -0.12
CPNE3-205ENST00000522240 IKZF4Q9H2S9 585 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 MINDY3Q9H8M7 445 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 METTL14Q9HCE5 456 aaKnown RBP14.28□□□□□ -0.12
CPNE3-205ENST00000522240 NOD1Q9Y239 953 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 TRPV2Q9Y5S1 764 aa14.28□□□□□ -0.12
CPNE3-205ENST00000522240 ANKRD63C9JTQ0 380 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 CLIC2O15247 247 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 TOM1L1O75674 476 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 SFPQP23246 707 aaKnown RBP eCLIP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 CDK7P50613 346 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 CRYBB1P53674 252 aaPredicted RBP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 PPP2R3AQ06190 1150 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 MGAT3Q09327 533 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 PRPF4BQ13523 1007 aaKnown RBP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 KRT31Q15323 416 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 TRIM71Q2Q1W2 868 aaKnown RBP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 APTXQ7Z2E3 356 aaKnown RBP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 FRMD5Q7Z6J6 570 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 XXYLT1Q8NBI6 393 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 POMGNT1Q8WZA1 660 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 DDX27Q96GQ7 796 aaKnown RBP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 ZNF668Q96K58 619 aaPredicted RBP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 PPP1R16BQ96T49 567 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 OSMRQ99650 979 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 ACO2Q99798 780 aaKnown RBP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 CBWD1Q9BRT8 395 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 TARS2Q9BW92 718 aaKnown RBP14.27□□□□□ -0.13
CPNE3-205ENST00000522240 HSPBP1Q9NZL4 362 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 TNFSF13BQ9Y275 285 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 FRMD4BQ9Y2L6 1034 aa14.27□□□□□ -0.13
CPNE3-205ENST00000522240 TRIOBPQ9H2D6 2365 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 LRRC10BA6NIK2 292 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 TISP43B9A030 160 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 AP5Z1O43299 807 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 B4GALT4O60513 344 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 EXOC3O60645 756 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 AKAP3O75969 853 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 ERLIN2O94905 339 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 SERPINC1P01008 464 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 TFRCP02786 760 aaKnown RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 TPM3P06753 285 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 TPM2P07951 284 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 COL6A1P12109 1028 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 EN2P19622 333 aaPredicted RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 PROZP22891 400 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 EIF4BP23588 611 aaKnown RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 ADSSP30520 456 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 AXLP30530 894 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 PSMC2P35998 433 aaKnown RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 MTIF2P46199 727 aaKnown RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 CYP2J2P51589 502 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 COPB1P53618 953 aaKnown RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 ENPEPQ07075 957 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 MCL1Q07820 350 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 TMEM62Q0P6H9 643 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 SNX17Q15036 470 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 HSP90AA4PQ58FG1 418 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 ATF7IP2Q5U623 682 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 C1orf53Q5VUE5 145 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 TSHZ1Q6ZSZ6 1077 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 TRIM59Q8IWR1 403 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 FAM126BQ8IXS8 530 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 FAM186BQ8IYM0 893 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 CCDC155Q8N6L0 562 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 DHX38Q92620 1227 aaKnown RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 WNT8BQ93098 351 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 MRFAP1L1Q96HT8 127 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 FBXL18Q96ME1 805 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 CELF4Q9BZC1 486 aaKnown RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 TRIM5Q9C035 493 aa14.26□□□□□ -0.13
CPNE3-205ENST00000522240 SENP6Q9GZR1 1112 aaPredicted RBP14.26□□□□□ -0.13
CPNE3-205ENST00000522240 KIAA1586Q9HCI6 787 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms