RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SGSM2O43147 1006 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 RPS6KA5O75582 802 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 SSBP05455 408 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 GALTP07902 379 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 IFIT2P09913 472 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 PDHBP11177 359 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 INSRRP14616 1297 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 FSHRP23945 695 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 HOXA6P31267 233 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 ALDH7A1P49419 539 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 HSD17B4P51659 736 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 SIM1P81133 766 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 KRT76Q01546 638 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 GHRHRQ02643 423 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 ZNF543Q08ER8 600 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 CCNI2Q6ZMN8 369 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 STOX1Q6ZVD7 989 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 ZNF598Q86UK7 904 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 LAPTM4BQ86VI4 370 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 ECHDC2Q86YB7 292 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 SPEM1Q8N4L4 309 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 ZNF513Q8N8E2 541 aaPredicted RBP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 HELQQ8TDG4 1101 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 TRAPPC12Q8WVT3 735 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 GAB3Q8WWW8 586 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 FGF13Q92913 245 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 ZC3H10Q96K80 434 aaKnown RBP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 EMILIN2Q9BXX0 1053 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 ANO2Q9NQ90 1003 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 ECHDC1Q9NTX5 307 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 SRPK3Q9UPE1 567 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 PCDHA2Q9Y5H9 948 aa8.33□□□□□ -1.08
CTNNA1-227ENST00000521387 FBN2P35556 2912 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 A0A087WV48 116 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 GSTTP1A0A1W2PQM5 241 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 TEX28O15482 410 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 MRPS9P82933 396 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 SP4Q02446 784 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 COLEC12Q5KU26 742 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 Q6ZS52 159 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 TAS1R1Q7RTX1 841 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 PIP4P1Q86T03 277 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 LSM14AQ8ND56 463 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 ITFG1Q8TB96 612 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 TNPO1Q92973 898 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 OSBP2Q969R2 916 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 PCYT2Q99447 389 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 TMEM47Q9BQJ4 181 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 PHF20Q9BVI0 1012 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 UBA5Q9GZZ9 404 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 LSG1Q9H089 658 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 NRDE2Q9H7Z3 1164 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 PIDD1Q9HB75 910 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 ZNF287Q9HBT7 754 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 RBM12Q9NTZ6 932 aaKnown RBP8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 PAG1Q9NWQ8 432 aa8.32□□□□□ -1.08
CTNNA1-227ENST00000521387 ABCB11O95342 1321 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 ATG2BQ96BY7 2078 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 M0QZ92 97 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 HOXA2O43364 376 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 EPB41L2O43491 1005 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 RPP40O75818 363 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 WISP1O95388 367 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 CFBP00751 764 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 HSP90AA1P07900 732 aaKnown RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 HSPA4P34932 840 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 TCF7P36402 384 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 PXNP49023 591 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 SLC11A1P49279 550 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 NEK4P51957 841 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 ANAPC15P60006 121 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 PTGDRQ13258 359 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 NEDD9Q14511 834 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 PLCB4Q15147 1175 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 PLK5Q496M5 336 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 FAM43BQ6ZT52 329 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 MTSS1LQ765P7 747 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 GRASPQ7Z6J2 395 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 MCF2L2Q86YR7 1114 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 FAM3CQ92520 227 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 PHKBQ93100 1093 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 INPP4AQ96PE3 977 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 DUSP15Q9H1R2 295 aaPredicted RBP8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 BOLA2Q9H3K6 86 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 PRORYQ9H606 182 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 TMEM9BQ9NQ34 198 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 DNAJB4Q9UDY4 337 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 GINS2Q9Y248 185 aa8.31□□□□□ -1.08
CTNNA1-227ENST00000521387 NOTCH4Q99466 2003 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 COL4A2P08572 1712 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 SMIM35A0A1B0GVV1 85 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 BCLAF3A2AJT9 711 aaKnown RBP8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 RRN3P2A6NIE6 340 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 PATE3B3GLJ2 98 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 H0Y626 953 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 MAN2B1O00754 1011 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 GPR182O15218 404 aa8.3□□□□□ -1.08
CTNNA1-227ENST00000521387 ZC3H11AO75152 810 aaKnown RBP eCLIP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms