RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 DLX2Q07687 328 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 TMEM62Q0P6H9 643 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 KRT72Q14CN4 511 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 UBE3CQ15386 1083 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 DGKDQ16760 1214 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 C19orf54Q5BKX5 351 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 APOA5Q6Q788 366 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 LMBR1LQ6UX01 489 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 ATG14Q6ZNE5 492 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 SMARCC2Q8TAQ2 1214 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 KLHDC4Q8TBB5 520 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 PARD3BQ8TEW8 1205 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 ANKS1AQ92625 1134 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 RPGRQ92834 1020 aaKnown RBP4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 DDX11Q96FC9 970 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 SGCZQ96LD1 299 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 SAMD11Q96NU1 681 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 NT5C1BQ96P26 610 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 C11orf84Q9BUA3 381 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 C22orf23Q9BZE7 217 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 DCP1AQ9NPI6 582 aaPredicted RBP4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 DAAM1Q9Y4D1 1078 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 PCDHGB6Q9Y5F9 930 aa4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 CFAP20Q9Y6A4 193 aaKnown RBP4.38□□□□□ -1.71
HMGN1P28-201ENST00000521340 ABHD14A-ACY1A0A1B0GW23 586 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 LRRC14BA6NHZ5 514 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 FRS3O43559 492 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 SGTAO43765 313 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 PEX10O60683 326 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 CHGBP05060 677 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 IFIT2P09913 472 aaKnown RBP4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 NBPF7P0C2Y1 421 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 AK2P54819 239 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 NCKAP1LP55160 1127 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 MLLT6P55198 1093 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 BRD3Q15059 726 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 CNN3Q15417 329 aaKnown RBP4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 KIAA0753Q2KHM9 967 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 MST1LQ2TV78 715 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 RNF220Q5VTB9 566 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 GRAMD4Q6IC98 578 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 XRRA1Q6P2D8 792 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 KLHDC10Q6PID8 442 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 TTLL10Q6ZVT0 673 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 MAEAQ7L5Y9 396 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 TAS1R1Q7RTX1 841 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 STK32CQ86UX6 486 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 MSL3Q8N5Y2 521 aaKnown RBP4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 HDAC10Q969S8 669 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 HIST1H2AHQ96KK5 128 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 HIST1H2AJQ99878 128 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 EPB41L4BQ9H329 900 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 FAM204AQ9H8W3 233 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 SPATA6Q9NWH7 488 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 SMG5Q9UPR3 1016 aaKnown RBP4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 STXBP5LQ9Y2K9 1186 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 NR2E3Q9Y5X4 410 aa4.37□□□□□ -1.71
HMGN1P28-201ENST00000521340 NT5C1B-RDH14C9J2C7 533 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 MYO1FO00160 1098 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 GOLIM4O00461 696 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 CREB3O43889 395 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 PLA2G1BP04054 148 aaKnown RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 MYL3P08590 195 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 LTA4HP09960 611 aaKnown RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 MYF5P13349 255 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 HNRNPLP14866 589 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZKSCAN1P17029 563 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 IL12RB1P42701 662 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 CASP5P51878 434 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 ADAM8P78325 824 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 MEF2AQ02078 507 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 MGAT5Q09328 741 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 TOP3AQ13472 1001 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 KCNA10Q16322 511 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZNF827Q17R98 1081 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 TUBB8Q3ZCM7 444 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 CCDC149Q6ZUS6 474 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 LARP4Q71RC2 724 aaKnown RBP eCLIP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 CLEC14AQ86T13 490 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZC3H18Q86VM9 953 aaKnown RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 SKAP1Q86WV1 359 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 GLB1L2Q8IW92 636 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZGPATQ8N5A5 531 aaKnown RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 KYQ8NBH2 561 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 OR10H5Q8NGA6 315 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 IFI44Q8TCB0 444 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 SNX33Q8WV41 574 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 ZCCHC14Q8WYQ9 949 aaKnown RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 KCNN1Q92952 543 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 PHKBQ93100 1093 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 APIPQ96GX9 242 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 DYDC2Q96IM9 177 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 MCOLN1Q9GZU1 580 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 EPB41L4AQ9HCS5 686 aaPredicted RBP4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 TRPS1Q9UHF7 1281 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 RPTORQ8N122 1335 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 ATRNL1Q5VV63 1379 aa4.36□□□□□ -1.71
HMGN1P28-201ENST00000521340 A0A0G2JNJ9 132 aa4.35□□□□□ -1.71
HMGN1P28-201ENST00000521340 C2orf78A6NCI8 922 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms