RNA–Protein interactions for RNA: ENST00000520991.3

CLN8-205, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-205ENST00000520991 ARF4P18085 180 aaPredicted RBP17.55■□□□□ 0.4
CLN8-205ENST00000520991 TRAPPC10P48553 1259 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 AFF1P51825 1210 aaKnown RBP17.55■□□□□ 0.4
CLN8-205ENST00000520991 CES5AQ6NT32 575 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 POTEGQ6S5H5 508 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 APOL6Q9BWW8 343 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 GPRC5CQ9NQ84 441 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 FAN1Q9Y2M0 1017 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 HES2Q9Y543 173 aa17.55■□□□□ 0.4
CLN8-205ENST00000520991 TRIOO75962 3097 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 ARL5CA6NH57 179 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 RPA1P27694 616 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 PLA2G5P39877 138 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 MLH1P40692 756 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 AMHR2Q16671 573 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 HAUS3Q68CZ6 603 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 GAD1Q99259 594 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 RNF39Q9H2S5 420 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 IRAK3Q9Y616 596 aa17.54■□□□□ 0.4
CLN8-205ENST00000520991 NRP1O14786 923 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 B4GALT5O43286 388 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
CLN8-205ENST00000520991 OR1G1P47890 313 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 ITIH3Q06033 890 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 NBR1Q14596 966 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 RABEP1Q15276 862 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 PTPN14Q15678 1187 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 SLC27A1Q6PCB7 646 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 ZBTB8OSQ8IWT0 167 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 VN1R3Q9BXE9 311 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 NXF3Q9H4D5 531 aaKnown RBP17.53■□□□□ 0.4
CLN8-205ENST00000520991 DZANK1Q9NVP4 752 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 PRG3Q9Y2Y8 225 aaPredicted RBP17.53■□□□□ 0.4
CLN8-205ENST00000520991 KIF3AQ9Y496 699 aa17.53■□□□□ 0.4
CLN8-205ENST00000520991 ARIH1Q9Y4X5 557 aaPredicted RBP17.53■□□□□ 0.4
CLN8-205ENST00000520991 ST18O60284 1047 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 NR1I2O75469 434 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 NPTXRO95502 500 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 SP100P23497 879 aaPredicted RBP17.52■□□□□ 0.4
CLN8-205ENST00000520991 CCT6AP40227 531 aaKnown RBP17.52■□□□□ 0.4
CLN8-205ENST00000520991 SCNN1GP51170 649 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 TMEM132AQ24JP5 1023 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 RARS2Q5T160 578 aaKnown RBP17.52■□□□□ 0.4
CLN8-205ENST00000520991 PADI6Q6TGC4 694 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 PPFIBP1Q86W92 1011 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 CDR2LQ86X02 465 aaPredicted RBP17.52■□□□□ 0.4
CLN8-205ENST00000520991 EDAQ92838 391 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 ZFP42Q96MM3 310 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 NECTIN4Q96NY8 510 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 EMILIN2Q9BXX0 1053 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 C2orf40Q9H1Z8 148 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 ADAM7Q9H2U9 754 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 PRMT7Q9NVM4 692 aaPredicted RBP17.52■□□□□ 0.4
CLN8-205ENST00000520991 GIT1Q9Y2X7 761 aa17.52■□□□□ 0.4
CLN8-205ENST00000520991 SPDYE4A6NLX3 237 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 INPPL1O15357 1258 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 URODP06132 367 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 EPCAMP16422 314 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 MUTP22033 750 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 U2AF2P26368 475 aaKnown RBP eCLIP17.51■□□□□ 0.394e-7■■■■■ 30.7
CLN8-205ENST00000520991 FXR2P51116 673 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLN8-205ENST00000520991 CDCA2Q69YH5 1023 aaPredicted RBP17.51■□□□□ 0.39
CLN8-205ENST00000520991 CABP7Q86V35 215 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 COLGALT2Q8IYK4 626 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 PRIMPOLQ96LW4 560 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 RIPOR3Q96MK2 946 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 RAB34Q9BZG1 259 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 UPF2Q9HAU5 1272 aaKnown RBP17.51■□□□□ 0.39
CLN8-205ENST00000520991 MRPL17Q9NRX2 175 aaKnown RBP17.51■□□□□ 0.39
CLN8-205ENST00000520991 LRWD1Q9UFC0 647 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 PARP2Q9UGN5 583 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 CDH22Q9UJ99 828 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 NR2E1Q9Y466 385 aa17.51■□□□□ 0.39
CLN8-205ENST00000520991 A0A1B0GUA9 196 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 C2CD2LO14523 706 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 CYP11B2P19099 503 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 AKAP5P24588 427 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 KLRC2P26717 231 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 MTHFRP42898 656 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 PPP4R3CPQ6ZMV5 832 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 HFE2Q6ZVN8 426 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 C12orf76Q8N812 135 aaPredicted RBP17.5■□□□□ 0.39
CLN8-205ENST00000520991 C4orf32Q8N8J7 132 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 DEPTORQ8TB45 409 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 RPS6KC1Q96S38 1066 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 POMKQ9H5K3 350 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 MARCH5Q9NX47 278 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 STK24Q9Y6E0 443 aa17.5■□□□□ 0.39
CLN8-205ENST00000520991 SOD2P04179 222 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 WEE2P0C1S8 567 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 LIG1P18858 919 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 NAMPTP43490 491 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 ZXDAP98168 799 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 DSC1Q08554 894 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 PTGDRQ13258 359 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 PPP2R5AQ15172 486 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 MAPK6Q16659 721 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 MCTP1Q6DN14 999 aa17.49■□□□□ 0.39
CLN8-205ENST00000520991 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms