RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 KIF23Q02241 960 aaPredicted RBP7.48□□□□□ -1.21
PABPC1-216ENST00000520868 ADAM9Q13443 819 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 RASA3Q14644 834 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 RTP5Q14D33 572 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 SF3B3Q15393 1217 aaKnown RBP7.48□□□□□ -1.21
PABPC1-216ENST00000520868 UBXN11Q5T124 520 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 RGMBQ6NW40 437 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 FERMT3Q86UX7 667 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 FAM124AQ86V42 546 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 C2orf69Q8N8R5 385 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 PLBD2Q8NHP8 589 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 UHMK1Q8TAS1 419 aaKnown RBP7.48□□□□□ -1.21
PABPC1-216ENST00000520868 MKL1Q969V6 931 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 DCPSQ96C86 337 aaKnown RBP7.48□□□□□ -1.21
PABPC1-216ENST00000520868 KCNJ15Q99712 375 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 ISCA1Q9BUE6 129 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 GBA2Q9HCG7 927 aaPredicted RBP7.48□□□□□ -1.21
PABPC1-216ENST00000520868 DUSP10Q9Y6W6 482 aa7.48□□□□□ -1.21
PABPC1-216ENST00000520868 SLC27A2O14975 620 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 LRG1P02750 347 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 RPS8P62241 208 aaKnown RBP7.47□□□□□ -1.21
PABPC1-216ENST00000520868 PAK1Q13153 545 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 PRR31Q5SQ13 230 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 TBC1D16Q8TBP0 767 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 DDX1Q92499 740 aaKnown RBP7.47□□□□□ -1.21
PABPC1-216ENST00000520868 EYA3Q99504 573 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 LNPKQ9C0E8 428 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 SNTG2Q9NY99 539 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 DBF4Q9UBU7 674 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-216ENST00000520868 TRPM7Q96QT4 1865 aa7.47□□□□□ -1.21
PABPC1-216ENST00000520868 CASP8AP2Q9UKL3 1982 aa7.46□□□□□ -1.21
PABPC1-216ENST00000520868 ELL2O00472 640 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-216ENST00000520868 APPP05067 770 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 CELA3BP08861 270 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 RPS12P25398 132 aaKnown RBP7.46□□□□□ -1.22
PABPC1-216ENST00000520868 KRTAP10-2P60368 255 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 GABREP78334 506 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 RALBP1Q15311 655 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 HABP4Q5JVS0 413 aaKnown RBP7.46□□□□□ -1.22
PABPC1-216ENST00000520868 FAM209AQ5JX71 171 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 PRAMEF18Q5VWM3 479 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 MTDHQ86UE4 582 aaKnown RBP7.46□□□□□ -1.22
PABPC1-216ENST00000520868 RUNDC1Q96C34 613 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 SRPK1Q96SB4 655 aaKnown RBP7.46□□□□□ -1.22
PABPC1-216ENST00000520868 IPPKQ9H8X2 491 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 RNF186Q9NXI6 227 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 DSEQ9UL01 958 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 TRAF6Q9Y4K3 522 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 ASTN2O75129 1339 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-216ENST00000520868 RTL9Q8NET4 1388 aa7.46□□□□□ -1.22
PABPC1-216ENST00000520868 THSD7BQ9C0I4 1608 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 TAF1P21675 1872 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 UFL1O94874 794 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 VIL1P09327 827 aaKnown RBP7.45□□□□□ -1.22
PABPC1-216ENST00000520868 FAM153BP0C7A2 387 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 COL6A2P12110 1019 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 TUSC3Q13454 348 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 WDR43Q15061 677 aaKnown RBP eCLIP7.45□□□□□ -1.22
PABPC1-216ENST00000520868 VASNQ6EMK4 673 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 BORAQ6PGQ7 559 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 MYD88Q99836 296 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 DHRS4Q9BTZ2 278 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 BDH2Q9BUT1 245 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 HYPKQ9NX55 129 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 GGA3Q9NZ52 723 aa7.45□□□□□ -1.22
PABPC1-216ENST00000520868 C9orf118A6NHY6 69 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 WNT9AO14904 365 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 ZNF28P17035 718 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 SOX10P56693 466 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 GRIN1Q05586 938 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 DDX10Q13206 875 aaKnown RBP7.44□□□□□ -1.22
PABPC1-216ENST00000520868 FOXB2Q5VYV0 432 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-216ENST00000520868 CLEC4DQ8WXI8 215 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 CDCA5Q96FF9 252 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 LCORQ96JN0 433 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-216ENST00000520868 EXOC2Q96KP1 924 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 L2HGDHQ9H9P8 463 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 CNOT11Q9UKZ1 510 aaKnown RBP7.44□□□□□ -1.22
PABPC1-216ENST00000520868 SCAF8Q9UPN6 1271 aaKnown RBP7.44□□□□□ -1.22
PABPC1-216ENST00000520868 MRPS23Q9Y3D9 190 aaKnown RBP7.44□□□□□ -1.22
PABPC1-216ENST00000520868 DUOX1Q9NRD9 1551 aa7.44□□□□□ -1.22
PABPC1-216ENST00000520868 FAM221BA6H8Z2 402 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 MROH6A6NGR9 719 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 DDX3XO00571 662 aaKnown RBP eCLIP7.43□□□□□ -1.22
PABPC1-216ENST00000520868 GSTA4O15217 222 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 NKRFO15226 690 aaKnown RBP eCLIP7.43□□□□□ -1.22
PABPC1-216ENST00000520868 HOXB7P09629 217 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 C6orf222P0C671 652 aaPredicted RBP7.43□□□□□ -1.22
PABPC1-216ENST00000520868 FAHP16930 419 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 CNR2P34972 360 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 EPHA5P54756 1037 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 GUCY1A3Q02108 690 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 CCDC152Q4G0S7 254 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 PAN2Q504Q3 1202 aaKnown RBP7.43□□□□□ -1.22
PABPC1-216ENST00000520868 MCTP2Q6DN12 878 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 TMC5Q6UXY8 1006 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 MOB2Q70IA6 237 aa7.43□□□□□ -1.22
PABPC1-216ENST00000520868 KCTD1Q719H9 257 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms