RNA–Protein interactions for RNA: ENST00000520867.5

CPEB4-208, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-208ENST00000520867 EBF3Q9H4W6 596 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 ZFYVE28Q9HCC9 887 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 CCDC177Q9NQR7 707 aaPredicted RBP13.65□□□□□ -0.22
CPEB4-208ENST00000520867 VPS51Q9UID3 782 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 SATB2Q9UPW6 733 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 SGTAO43765 313 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 COBLO75128 1261 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 DDHD2O94830 711 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 ENTPD1P49961 510 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 RAB15P59190 212 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 C16orf72Q14CZ0 275 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 EFHD2Q96C19 240 aaPredicted RBP13.65□□□□□ -0.22
CPEB4-208ENST00000520867 PSKH2Q96QS6 385 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 PLGRKTQ9HBL7 147 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 EMILIN3Q9NT22 766 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 UVRAGQ9P2Y5 699 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 STK39Q9UEW8 545 aa13.65□□□□□ -0.22
CPEB4-208ENST00000520867 BHMG1C9JSJ3 638 aaPredicted RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 POLR2DO15514 142 aaKnown RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 OCM2P0CE71 109 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 OCMP0CE72 109 aaPredicted RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 EIF3BP55884 814 aaKnown RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 RPS3AP61247 264 aaKnown RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 UBXN1Q04323 297 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 RALGDSQ12967 914 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 TXNRD1Q16881 649 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 FYB2Q5VWT5 728 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 ZNF449Q6P9G9 518 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 TTC23LQ6PF05 361 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 HDGFL2Q7Z4V5 671 aaPredicted RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 TMEM151BQ8IW70 566 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 KLHL7Q8IXQ5 586 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 TTLL11Q8NHH1 800 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 ACTRT2Q8TDY3 377 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 IFT122Q9HBG6 1241 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 CAPN11Q9UMQ6 739 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 FAM196BA6NMK8 535 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 GOLGA8CPA6NN73 597 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 CBX6O95503 412 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 CHEK2O96017 543 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 COL6A1P12109 1028 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 CRABP2P29373 138 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 ADCY8P40145 1251 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 CDC16Q13042 620 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 ACVR2BQ13705 512 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 C15orf59Q2T9L4 293 aaPredicted RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 NADK2Q4G0N4 442 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 DCAF6Q58WW2 860 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 ARHGEF18Q6ZSZ5 1173 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 TMTC3Q6ZXV5 915 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 CLVS1Q8IUQ0 354 aaPredicted RBP13.64□□□□□ -0.23
CPEB4-208ENST00000520867 LILRB2Q8N423 598 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 GPR108Q9NPR9 543 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 CHKBQ9Y259 395 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 COL15A1P39059 1388 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 MROH2AA6NES4 1674 aa13.64□□□□□ -0.23
CPEB4-208ENST00000520867 ERVV-2B6SEH9 535 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 DDX3XO00571 662 aaKnown RBP eCLIP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 ADCY6O43306 1168 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 CDH3P22223 829 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 POLGP54098 1239 aaPredicted RBP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 TNIP1Q15025 636 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 SPA17Q15506 151 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 KLHDC7AQ5VTJ3 777 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 INTS8Q75QN2 995 aaKnown RBP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 CPSF7Q8N684 471 aaKnown RBP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 FAM20AQ96MK3 541 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 AZI2Q9H6S1 392 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 GPSM3Q9Y4H4 160 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 LAMA4Q16363 1823 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 EYA4O95677 639 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 RPL5P46777 297 aaKnown RBP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 APLP1P51693 650 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 ITIH5Q86UX2 942 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 EPB41L4BQ9H329 900 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 SLC38A7Q9NVC3 462 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 GIN1Q9NXP7 522 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 DMTF1Q9Y222 760 aa13.63□□□□□ -0.23
CPEB4-208ENST00000520867 ARHGEF28Q8N1W1 1705 aaKnown RBP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
CPEB4-208ENST00000520867 A6NL46 340 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 SOBPA7XYQ1 873 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 K7EPI3 171 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 PFDN6O15212 129 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 ICMTO60725 284 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 CRYZL1O95825 349 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 FYNP06241 537 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 PCYT1AP49585 367 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 RASSF2P50749 326 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 RNASE9P60153 205 aaKnown RBP13.62□□□□□ -0.23
CPEB4-208ENST00000520867 CRB1P82279 1406 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 DPYDQ12882 1025 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 SEPT6Q14141 434 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 SPCS2Q15005 226 aa13.62□□□□□ -0.23
CPEB4-208ENST00000520867 CYB5R4Q7L1T6 521 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms