RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 NR3C1P04150 777 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 IFNAR2P48551 515 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 CYP27A1Q02318 531 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 CAPRIN1Q14444 709 aaKnown RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 C7orf31Q8N865 590 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 PPP1R14BQ96C90 147 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 SUN2Q9UH99 717 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 GMNCA6NCL1 334 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 GSNP06396 782 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 TRIP13Q15645 432 aaPredicted RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 CYP4F22Q6NT55 531 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 RBM46Q8TBY0 533 aaKnown RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 KCNV2Q8TDN2 545 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 FAM167AQ96KS9 214 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 FAM20AQ96MK3 541 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 CALN1Q9BXU9 219 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 DDX28Q9NUL7 540 aaKnown RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 LZTS1Q9Y250 596 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 UBXN8O00124 270 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 DAB1O75553 588 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 ANP32DO95626 131 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 ANXA13P27216 316 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 STXBP2Q15833 593 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 KBTBD12Q3ZCT8 623 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 OTUB1Q96FW1 271 aaPredicted RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 SGSM3Q96HU1 749 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 ZMYND12Q9H0C1 365 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 RAVER2Q9HCJ3 691 aaKnown RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 TBC1D22BQ9NU19 505 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 STMN3Q9NZ72 180 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 PNPLA7Q6ZV29 1317 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 GSG1L2A8MUP6 293 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 PRCPP42785 496 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 CCDC85BQ15834 202 aaPredicted RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 KIF19Q2TAC6 998 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 ALKBH5Q6P6C2 394 aaKnown RBP12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 FRA10AC1Q70Z53 315 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 ERICH1Q86X53 443 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 KSR1Q8IVT5 923 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 KIAA1586Q9HCI6 787 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 SLC40A1Q9NP59 571 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 REREQ9P2R6 1566 aa12.85□□□□□ -0.35
ERGIC1-208ENST00000520399 KRT87PA6NCN2 255 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 TOM1L1O75674 476 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 EIF3BP55884 814 aaKnown RBP12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 MAP3K10Q02779 954 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 TNFAIP2Q03169 654 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 HIF1AQ16665 826 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 ARMCX2Q7L311 632 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 PODNQ7Z5L7 613 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 NEK9Q8TD19 979 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 NLRP4Q96MN2 994 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 ATF5Q9Y2D1 282 aaPredicted RBP12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 MYO3AQ8NEV4 1616 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 SPAG7O75391 227 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 KCNA3P22001 575 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 SLC7A5Q01650 507 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 SLC27A3Q5K4L6 730 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 PADI6Q6TGC4 694 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 ADGRF4Q8IZF3 695 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 DNAAF3Q8N9W5 541 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 VIPAS39Q9H9C1 493 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 WARS2Q9UGM6 360 aaKnown RBP12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 ABCA9Q8IUA7 1624 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 DLC1Q96QB1 1528 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 STK25O00506 426 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 ORC4O43929 436 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 DNAJC6O75061 913 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 PALMO75781 387 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 PLS3P13797 630 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 SERPINB4P48594 390 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 ARPC4P59998 168 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 FAM180AQ6UWF9 173 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 UBE2Q1Q7Z7E8 422 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 DHX40Q8IX18 779 aaKnown RBP12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 HSPH1Q92598 858 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 CARD9Q9H257 536 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 SUPT3HO75486 399 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 MT-ND3P03897 115 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 PSMA2P25787 234 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 PSMA3P25788 255 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 OCRLQ01968 901 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 TEDDM1Q5T9Z0 273 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 PLA2G12BQ9BX93 195 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 ZWILCHQ9H900 591 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 HOXC10Q9NYD6 342 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 L3MBTL1Q9Y468 752 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 CFLARO15519 480 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 MYL3P08590 195 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 FMO2Q99518 471 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 FBXO40Q9UH90 709 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 MOSPD1Q9UJG1 213 aa12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
ERGIC1-208ENST00000520399 NCF2P19878 526 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms