RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 NLGN2Q8NFZ4 835 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 PARD3BQ8TEW8 1205 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 CAVIN3Q969G5 261 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 CDHR1Q96JP9 859 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 C17orf75Q9HAS0 396 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 AMFRQ9UKV5 643 aa27.84■■■□□ 2.05
COL13A1-213ENST00000520267 NOC2LQ9Y3T9 749 aaKnown RBP27.84■■■□□ 2.05
COL13A1-213ENST00000520267 ANKRD62A6NC57 917 aa27.83■■■□□ 2.05
COL13A1-213ENST00000520267 GOLGA6BA6NDN3 693 aa27.83■■■□□ 2.05
COL13A1-213ENST00000520267 LMAN1P49257 510 aa27.83■■■□□ 2.05
COL13A1-213ENST00000520267 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.83■■■□□ 2.05
COL13A1-213ENST00000520267 IFT81Q8WYA0 676 aa27.83■■■□□ 2.05
COL13A1-213ENST00000520267 KREMEN1Q96MU8 473 aa27.83■■■□□ 2.05
COL13A1-213ENST00000520267 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.83■■■□□ 2.05
COL13A1-213ENST00000520267 AP1M1Q9BXS5 423 aa27.83■■■□□ 2.05
COL13A1-213ENST00000520267 NFU1Q9UMS0 254 aa27.83■■■□□ 2.05
COL13A1-213ENST00000520267 MYH9P35579 1960 aaKnown RBP27.83■■■□□ 2.05
COL13A1-213ENST00000520267 PGRMC1O00264 195 aaKnown RBP27.83■■■□□ 2.04
COL13A1-213ENST00000520267 USP8P40818 1118 aa27.83■■■□□ 2.04
COL13A1-213ENST00000520267 SP2Q02086 613 aa27.83■■■□□ 2.04
COL13A1-213ENST00000520267 RPUSD2Q8IZ73 545 aaKnown RBP27.83■■■□□ 2.04
COL13A1-213ENST00000520267 RASGEF1CQ8N431 466 aa27.83■■■□□ 2.04
COL13A1-213ENST00000520267 CASKIN2Q8WXE0 1202 aa27.83■■■□□ 2.04
COL13A1-213ENST00000520267 CYP26B1Q9NR63 512 aa27.83■■■□□ 2.04
COL13A1-213ENST00000520267 COG5Q9UP83 839 aa27.83■■■□□ 2.04
COL13A1-213ENST00000520267 LOC285556D6RIA3 1793 aa27.83■■■□□ 2.04
COL13A1-213ENST00000520267 DGAT1O75907 488 aa27.82■■■□□ 2.04
COL13A1-213ENST00000520267 SGPL1O95470 568 aa27.82■■■□□ 2.04
COL13A1-213ENST00000520267 TRADDQ15628 312 aa27.82■■■□□ 2.04
COL13A1-213ENST00000520267 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.82■■■□□ 2.04
COL13A1-213ENST00000520267 TOPORSQ9NS56 1045 aaPredicted RBP27.82■■■□□ 2.04
COL13A1-213ENST00000520267 STAM2O75886 525 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 GNPTABQ3T906 1256 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 POMGNT1Q8WZA1 660 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 FAM204AQ9H8W3 233 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 PPP2R3BQ9Y5P8 575 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 PEX10O60683 326 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 FAM153BP0C7A2 387 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 FSTL1Q12841 308 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 FAM153CQ494X1 144 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 KRT39Q6A163 491 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 PPM1KQ8N3J5 372 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 MCPH1Q8NEM0 835 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 MFSD14AQ96MC6 490 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 FBXL18Q96ME1 805 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 FAM153AQ9UHL3 310 aa27.81■■■□□ 2.04
COL13A1-213ENST00000520267 USP2O75604 605 aaPredicted RBP27.8■■■□□ 2.04
COL13A1-213ENST00000520267 MIS18BP1Q6P0N0 1132 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 DLK2Q6UY11 383 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 TAS1R3Q7RTX0 852 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 FAM71AQ8IYT1 594 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 ISCUQ9H1K1 167 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 ATP6V0A4Q9HBG4 840 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 TMEM8AQ9HCN3 771 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 DDX3YO15523 660 aaKnown RBP27.8■■■□□ 2.04
COL13A1-213ENST00000520267 FTLP02792 175 aaPredicted RBP27.8■■■□□ 2.04
COL13A1-213ENST00000520267 SUPT20HL2P0C7V6 817 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 CHRNB2P17787 502 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 PAK2Q13177 524 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 SUPT20HL1Q3ZLR7 823 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 MTERF2Q49AM1 385 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 SH3D19Q5HYK7 790 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 CALR3Q96L12 384 aaKnown RBP27.8■■■□□ 2.04
COL13A1-213ENST00000520267 PCDHB18PQ96TA0 734 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 COQ4Q9Y3A0 265 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 MYPNQ86TC9 1320 aa27.8■■■□□ 2.04
COL13A1-213ENST00000520267 CNTN2Q02246 1040 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 NOP9Q86U38 636 aaKnown RBP27.79■■■□□ 2.04
COL13A1-213ENST00000520267 TMC2Q8TDI7 906 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 EPS8L1Q8TE68 723 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 POLR3FQ9H1D9 316 aaPredicted RBP27.79■■■□□ 2.04
COL13A1-213ENST00000520267 ACP6Q9NPH0 428 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 NOCTQ9UK39 431 aaKnown RBP27.79■■■□□ 2.04
COL13A1-213ENST00000520267 RTP1P59025 263 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 CYP24A1Q07973 514 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 NNTQ13423 1086 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 TAF3Q5VWG9 929 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 TAS1R2Q8TE23 839 aa27.79■■■□□ 2.04
COL13A1-213ENST00000520267 ZNF526Q8TF50 670 aaPredicted RBP27.79■■■□□ 2.04
COL13A1-213ENST00000520267 KRIT1O00522 736 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 CYP26A1O43174 497 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 ITGA4P13612 1032 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 CYFIP1Q7L576 1253 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 PROCA1Q8NCQ7 364 aaPredicted RBP27.78■■■□□ 2.04
COL13A1-213ENST00000520267 HELQQ8TDG4 1101 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 ELMO3Q96BJ8 720 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 HNRNPDLO14979 420 aaKnown RBP27.78■■■□□ 2.04
COL13A1-213ENST00000520267 ATP4AP20648 1035 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 GPC3P51654 580 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 MFAP3P55082 362 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 XKR3Q5GH77 459 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 TREML2Q5T2D2 321 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 GPC2Q8N158 579 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 SHC3Q92529 594 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 DDX47Q9H0S4 455 aaKnown RBP27.78■■■□□ 2.04
COL13A1-213ENST00000520267 SNCAIPQ9Y6H5 919 aa27.78■■■□□ 2.04
COL13A1-213ENST00000520267 STXBP2Q15833 593 aa27.77■■■□□ 2.04
COL13A1-213ENST00000520267 DCAF12L1Q5VU92 463 aa27.77■■■□□ 2.04
COL13A1-213ENST00000520267 SLC47A2Q86VL8 602 aa27.77■■■□□ 2.04
COL13A1-213ENST00000520267 RHOT2Q8IXI1 618 aa27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms