RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 NELL1Q92832 810 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 EVI5LQ96CN4 794 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 ZSCAN10Q96SZ4 725 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 NELL2Q99435 816 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 IER2Q9BTL4 223 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 VAT1LQ9HCJ6 419 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 JPH1Q9HDC5 661 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 WDR6Q9NNW5 1121 aaKnown RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 SPATA6Q9NWH7 488 aaPredicted RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 SSX2IPQ9Y2D8 614 aa5.58□□□□□ -1.52
SDCBP-207ENST00000520168 NOC2LQ9Y3T9 749 aaKnown RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 DSPP15924 2871 aaKnown RBP5.58□□□□□ -1.52
SDCBP-207ENST00000520168 FASNP49327 2511 aaKnown RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 NFASCO94856 1347 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 NEDD4P46934 1319 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 PNMA6FA0A0J9YX94 578 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 TMEM8BA6NDV4 472 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 RBAK-RBAKDNI3L0D1 243 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 ZNF213O14771 459 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 HBP1O60381 514 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 PPP1R11O60927 126 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 CLSTN1O94985 981 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 PAPLNO95428 1278 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 PROS1P07225 676 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 IBSPP21815 317 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 TGM1P22735 817 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 PMLP29590 882 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 RPS9P46781 194 aaKnown RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 STAT5BP51692 787 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 LIMK1P53667 647 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 BCAR1P56945 870 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 FGD1P98174 961 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 PFKPQ01813 784 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 MTMR1Q13613 665 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 DSC3Q14574 896 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 IFIT1BQ5T764 474 aaKnown RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 ERICH6BQ5W0A0 696 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 TSHZ3Q63HK5 1081 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 CELF5Q8N6W0 485 aaKnown RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 ENAHQ8N8S7 591 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 GPR152Q8TDT2 470 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 HDAC7Q8WUI4 952 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 TSC1Q92574 1164 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 IGSF21Q96ID5 467 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 ZKSCAN3Q9BRR0 538 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 UBAC1Q9BSL1 405 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 DDX23Q9BUQ8 820 aaKnown RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 KRT23Q9C075 422 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 RIOX1Q9H6W3 641 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 CNNM2Q9H8M5 875 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 DACT1Q9NYF0 836 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 RTEL1Q9NZ71 1219 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 SLC9A2Q9UBY0 812 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 GINS2Q9Y248 185 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 FREM2Q5SZK8 3169 aa5.57□□□□□ -1.52
SDCBP-207ENST00000520168 PDCD11Q14690 1871 aaKnown RBP5.57□□□□□ -1.52
SDCBP-207ENST00000520168 ITPR1Q14643 2758 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 A0A0U1RQF3 1178 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 PALM3A6NDB9 673 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-207ENST00000520168 ANHXE9PGG2 379 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 N4BP1O75113 896 aaKnown RBP5.56□□□□□ -1.52
SDCBP-207ENST00000520168 ZC3H11AO75152 810 aaKnown RBP eCLIP5.56□□□□□ -1.52
SDCBP-207ENST00000520168 ADH1AP07327 375 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 RETP07949 1114 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 SKIP12755 728 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 GLULP15104 373 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 MX1P20591 662 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 KLRC2P26717 231 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 PBX3P40426 434 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 METAP2P50579 478 aaKnown RBP eCLIP5.56□□□□□ -1.52
SDCBP-207ENST00000520168 HAND2P61296 217 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 CSTF1Q05048 431 aaKnown RBP5.56□□□□□ -1.52
SDCBP-207ENST00000520168 HTR4Q13639 388 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 COL9A3Q14050 684 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-207ENST00000520168 MCM6Q14566 821 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 PLCB4Q15147 1175 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 CSRP2Q16527 193 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 ZNF484Q5JVG2 852 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 ZBTB41Q5SVQ8 909 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 FAM160B1Q5W0V3 765 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 IL31Q6EBC2 164 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 PRR23CQ6ZRP0 262 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 MTSS1LQ765P7 747 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 FAM228AQ86W67 206 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 ECHDC2Q86YB7 292 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 HOMER1Q86YM7 354 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 TBC1D10CQ8IV04 446 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 TEX2Q8IWB9 1127 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 KIAA0319LQ8IZA0 1049 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 STAG2Q8N3U4 1231 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 TMEM40Q8WWA1 233 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 PHKBQ93100 1093 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 KLHL5Q96PQ7 755 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 OSMRQ99650 979 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 SDF4Q9BRK5 362 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 FOXQ1Q9C009 403 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 PLEKHA4Q9H4M7 779 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 DCTPP1Q9H773 170 aa5.56□□□□□ -1.52
SDCBP-207ENST00000520168 PRMT8Q9NR22 394 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-207ENST00000520168 MAN1C1Q9NR34 630 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms