RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 TTYH1Q9H313 450 aaPredicted RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 PDZD7Q9H5P4 517 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 TMEM134Q9H6X4 195 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 ELAC1Q9H777 363 aaKnown RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 CERS4Q9HA82 394 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 RC3H2Q9HBD1 1191 aaKnown RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 PANK4Q9NVE7 773 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 TBC1D7Q9P0N9 293 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 KCNG1Q9UIX4 513 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 PCDHB2Q9Y5E7 798 aa13.03□□□□□ -0.32
HPS4-218ENST00000519774 FNDC1Q4ZHG4 1894 aaPredicted RBP13.03□□□□□ -0.32
HPS4-218ENST00000519774 KIAA1671Q9BY89 1806 aa13.02□□□□□ -0.32
HPS4-218ENST00000519774 NLRC5Q86WI3 1866 aa13.02□□□□□ -0.32
HPS4-218ENST00000519774 TMEM265A0A087WTH1 108 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 FAM237AA0A1B0GTK4 181 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 A0A1B0GUA9 196 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 MEIS3P2A8K0S8 358 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 HOXA2O43364 376 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 SLFN14P0C7P3 912 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 TAP1Q03518 808 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 HERC4Q5GLZ8 1057 aaPredicted RBP13.02□□□□□ -0.33
HPS4-218ENST00000519774 NT5DC1Q5TFE4 455 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 ATF7IP2Q5U623 682 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
HPS4-218ENST00000519774 CCDC65Q8IXS2 484 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 DEFB123Q8N688 67 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
HPS4-218ENST00000519774 BICD1Q96G01 975 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 ADPGKQ9BRR6 497 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 NTPCRQ9BSD7 190 aaKnown RBP13.02□□□□□ -0.33
HPS4-218ENST00000519774 TARS2Q9BW92 718 aaKnown RBP13.02□□□□□ -0.33
HPS4-218ENST00000519774 TRAIPQ9BWF2 469 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.33
HPS4-218ENST00000519774 ZNF576Q9H609 170 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 RNF19AQ9NV58 838 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 MTUS1Q9ULD2 1270 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 INPP5FQ9Y2H2 1132 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 IPPQ9Y573 584 aa13.02□□□□□ -0.33
HPS4-218ENST00000519774 ZNF202O95125 648 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 EOMESO95936 686 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
HPS4-218ENST00000519774 ITGA4P13612 1032 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 COASYQ13057 564 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 ZNF568Q3ZCX4 644 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 ZC2HC1CQ53FD0 456 aaPredicted RBP13.01□□□□□ -0.33
HPS4-218ENST00000519774 CLLU1OSQ5K130 101 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 CMTR2Q8IYT2 770 aaKnown RBP13.01□□□□□ -0.33
HPS4-218ENST00000519774 SMG8Q8ND04 991 aaKnown RBP13.01□□□□□ -0.33
HPS4-218ENST00000519774 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
HPS4-218ENST00000519774 PGBD4Q96DM1 585 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 C7orf25Q9BPX7 421 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 TMEM117Q9H0C3 514 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 MRPL44Q9H9J2 332 aaKnown RBP13.01□□□□□ -0.33
HPS4-218ENST00000519774 ANKFY1Q9P2R3 1169 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 USP25Q9UHP3 1055 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 TNFSF13BQ9Y275 285 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 HES2Q9Y543 173 aa13.01□□□□□ -0.33
HPS4-218ENST00000519774 RALGAPA2Q2PPJ7 1873 aa13□□□□□ -0.33
HPS4-218ENST00000519774 COL4A4P53420 1690 aaPredicted RBP13□□□□□ -0.33
HPS4-218ENST00000519774 FRMD3A2A2Y4 597 aa13□□□□□ -0.33
HPS4-218ENST00000519774 HNRNPDLO14979 420 aaKnown RBP13□□□□□ -0.33
HPS4-218ENST00000519774 ZNF623O75123 536 aa13□□□□□ -0.33
HPS4-218ENST00000519774 GADD45BO75293 160 aaPredicted RBP13□□□□□ -0.33
HPS4-218ENST00000519774 GCNT3O95395 438 aa13□□□□□ -0.33
HPS4-218ENST00000519774 MATR3P43243 847 aaKnown RBP eCLIP13□□□□□ -0.33
HPS4-218ENST00000519774 CUL4BQ13620 913 aa13□□□□□ -0.33
HPS4-218ENST00000519774 DCAF4L1Q3SXM0 396 aa13□□□□□ -0.33
HPS4-218ENST00000519774 SPOUT1Q5T280 376 aaKnown RBP13□□□□□ -0.33
HPS4-218ENST00000519774 GLB1LQ6UWU2 654 aa13□□□□□ -0.33
HPS4-218ENST00000519774 KRBA2Q6ZNG9 492 aa13□□□□□ -0.33
HPS4-218ENST00000519774 MRPL10Q7Z7H8 261 aaKnown RBP13□□□□□ -0.33
HPS4-218ENST00000519774 ZBTB33Q86T24 672 aa13□□□□□ -0.33
HPS4-218ENST00000519774 HACE1Q8IYU2 909 aa13□□□□□ -0.33
HPS4-218ENST00000519774 SLC17A8Q8NDX2 589 aa13□□□□□ -0.33
HPS4-218ENST00000519774 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
HPS4-218ENST00000519774 FAM212AQ96EL1 285 aa13□□□□□ -0.33
HPS4-218ENST00000519774 PAGE5Q96GU1 130 aa13□□□□□ -0.33
HPS4-218ENST00000519774 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
HPS4-218ENST00000519774 ACO2Q99798 780 aaKnown RBP13□□□□□ -0.33
HPS4-218ENST00000519774 C17orf80Q9BSJ5 609 aa13□□□□□ -0.33
HPS4-218ENST00000519774 TCHPQ9BT92 498 aa13□□□□□ -0.33
HPS4-218ENST00000519774 SEMA6BQ9H3T3 888 aa13□□□□□ -0.33
HPS4-218ENST00000519774 RSAD1Q9HA92 442 aa13□□□□□ -0.33
HPS4-218ENST00000519774 HCSTQ9UBK5 93 aa13□□□□□ -0.33
HPS4-218ENST00000519774 PARP2Q9UGN5 583 aa13□□□□□ -0.33
HPS4-218ENST00000519774 TBX20Q9UMR3 447 aa13□□□□□ -0.33
HPS4-218ENST00000519774 MRPL42Q9Y6G3 142 aaKnown RBP13□□□□□ -0.33
HPS4-218ENST00000519774 GTPBP6O43824 516 aaPredicted RBP12.99□□□□□ -0.33
HPS4-218ENST00000519774 AKAP5P24588 427 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 CTNNB1P35222 781 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 MLH1P40692 756 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 LIG4P49917 911 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 CASP5P51878 434 aa12.99□□□□□ -0.33
HPS4-218ENST00000519774 FAM160A1Q05DH4 1040 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms